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Updated: Apr 5, 2026

Expression, Purification, and Liposome Binding of Budding Yeast SNX-BAR Heterodimers
Published on: December 6, 2019
Mdm1/Snx13 is a novel ER-endolysosomal interorganelle tethering protein
W Mike Henne1, Lu Zhu2, Zsolt Balogi2
1Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390 Mike.Henne@utsouthwestern.edu sde26@cornell.edu.
Abstract:
Although endolysosomal trafficking is well defined, how it is regulated and coordinates with cellular metabolism is unclear. To identify genes governing endolysosomal dynamics, we conducted a global fluorescence-based screen to reveal endomembrane effector genes. Screening implicated Phox (PX) domain-containing protein Mdm1 in endomembrane dynamics. Surprisingly, we demonstrate that Mdm1 is a novel interorganelle tethering protein that localizes to endoplasmic reticulum (ER)-vacuole/lysosome membrane contact sites (MCSs). We show that Mdm1 is ER anchored and contacts the vacuole surface in trans via its lipid-binding PX domain. Strikingly, overexpression of Mdm1 induced ER-vacuole hypertethering, underscoring its role as an interorganelle tether. We also show that Mdm1 and its paralogue Ydr179w-a (named Nvj3 in this study) localize to ER-vacuole MCSs independently of established tether Nvj1. Finally, we find that Mdm1 truncations analogous to neurological disease-associated SNX14 alleles fail to tether the ER and vacuole and perturb sphingolipid metabolism. Our work suggests that human Mdm1 homologues may play previously unappreciated roles in interorganelle communication and lipid metabolism.
Insights
Phox (PX) domain-containing protein Mdm1 acts as a novel tether between the endoplasmic reticulum (ER) and vacuole/lysosome. This discovery reveals Mdm1
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Endolysosomal trafficking is crucial for cellular function but its regulation and coordination with metabolism remain unclear.
- Identifying key regulators of endomembrane dynamics is essential for understanding cellular processes.
Purpose of the Study:
- To identify novel genes involved in endomembrane dynamics and interorganelle communication.
- To characterize the function of Phox (PX) domain-containing protein Mdm1 in endolysosomal trafficking and membrane contact sites.
Main Methods:
- Global fluorescence-based genetic screen to identify endomembrane effector genes.
- Localization studies using microscopy to determine Mdm1's position within the cell.
- Analysis of Mdm1 truncations and their impact on ER-vacuole tethering and sphingolipid metabolism.
Main Results:
- Mdm1 was identified as a novel interorganelle tethering protein at endoplasmic reticulum (ER)-vacuole/lysosome membrane contact sites (MCSs).
- Mdm1 tethers the ER to the vacuole via its lipid-binding PX domain and its overexpression leads to hypertethering.
- Mdm1 and its paralogue Nvj3 localize to ER-vacuole MCSs independently of the known tether Nvj1; Mdm1 truncations disrupt tethering and sphingolipid metabolism.
Conclusions:
- Mdm1 functions as a critical tether at ER-vacuole MCSs, regulating interorganelle communication.
- Mdm1's role in sphingolipid metabolism highlights its importance in lipid homeostasis.
- Human Mdm1 homologues may have significant, previously unrecognized roles in cellular communication and lipid metabolism.
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