Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Health Information Technology and Healthcare Information System01:30

Health Information Technology and Healthcare Information System

3.7K
Health Information Technology (HIT)
Health Information Technology, commonly called HIT, integrates advanced information systems and technology in healthcare settings. Its primary functions include:
3.7K
Issues And Trends In Healthcare Delivery System01:29

Issues And Trends In Healthcare Delivery System

6.4K
The issues and trends in healthcare delivery are constantly changing. The COVID-19 pandemic is one recent issue that wreaked havoc on healthcare systems, causing a shortage of healthcare workers, high demand for medicines and supplies, and increased medical expenditure due to a lack of insurance. Other issues include rising healthcare costs and care fragmentation.
Cost Containment
Payment for healthcare services has historically promoted adoption of costly and often unnecessary or inefficient...
6.4K
Nursing Clinical Information System01:27

Nursing Clinical Information System

1.4K
Nursing Clinical Information System (NCIS)
A Nursing Clinical Information System (NCIS) is a specialized type of healthcare information system tailored to meet the unique needs of nursing practice. It incorporates the principles of nursing informatics to streamline information management and improve the quality of care delivery.
Critical attributes of NCIS include:
1.4K
Bioreactor Design and Operational System01:29

Bioreactor Design and Operational System

86
Bioreactors are engineered vessels designed to cultivate microorganisms under controlled conditions for industrial bioprocessing. They maintain sterility and allow precise regulation of pH, temperature, oxygen, and nutrient levels to optimize microbial growth and metabolite production. Bioreactors range from small laboratory units of 1 liter to industrial systems holding up to 500,000 liters, though only about 75% of their volume is actively used for fermentation. The remaining headspace...
86
Integrated Healthcare System01:20

Integrated Healthcare System

2.6K
An integrated healthcare system (IHS) is a set of organizations that provides for or arranges to provide coordinated and continuous service to a defined population. The IHS takes responsibility for that particular population's health status and outcome, both clinically and fiscally. An integrated healthcare system is a well-organized, well-coordinated, and collaborative network. The integrated delivery system is a network that connects different healthcare providers to deliver organized,...
2.6K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Single-nucleus profiling reveals age-associated remodeling opposed by parity in the postmenopausal human ovary.

bioRxiv : the preprint server for biology·2026
Same author

Strengthening Community-based Preventive Psychiatry-related Interventional Research in India by Employing SWOT Analysis.

Indian journal of psychological medicine·2026
Same author

Dual assessment of cepharanthine: In vitro and in vivo inhibitory effects on multi-host haemoprotozoa, Trypanosoma evansi.

Veterinary parasitology·2026
Same author

Prevalence and determinants of bovine theileriosis in India: a meta-analysis and meta-regression.

Tropical animal health and production·2026
Same author

Impact of case-driven reflective writing in teaching attitude, ethics, and communication (AETCOM) among the medical undergraduates from central India: Insights from an early exposure psychiatry enrichment program.

Indian journal of psychiatry·2026
Same author

Authors' Response, "Reply to the comments on Reporting guidelines for Case Reports In Mental health and Psychiatry (CRIMP)".

Indian journal of psychiatry·2026
Same journal

CoAff-DTI: Fine-grained drug-target interaction prediction using pre-trained language models and affinity-guided mechanisms.

Journal of biomedical informatics·2026
Same journal

Evaluation of temporal preservation in synthetic longitudinal patient data.

Journal of biomedical informatics·2026
Same journal

ARKE: An ontology-driven framework for automated mapping of local radiology procedure terms to the LOINC-RadLex playbook using large language model.

Journal of biomedical informatics·2026
Same journal

A validation-driven training controller for cross-lingual biomedical NER via reinforcement learning-based adaptive loss weighting.

Journal of biomedical informatics·2026
Same journal

ASP-HR: An Adaptive Spatial Perception and Hierarchical Reasoning mechanism for document-level biomedical relation extraction.

Journal of biomedical informatics·2026
Same journal

Beyond Accuracy: Safety-Centered guidelines for the evaluation of LLM-based therapy recommendation systems for chronic multimorbidity patients.

Journal of biomedical informatics·2026
See all related articles

Related Experiment Video

Updated: Apr 4, 2026

Biobank for Translational Medicine: Standard Operating Procedures for Optimal Sample Management
08:01

Biobank for Translational Medicine: Standard Operating Procedures for Optimal Sample Management

Published on: November 30, 2022

5.9K

caTissue Suite to OpenSpecimen: Developing an extensible, open source, web-based biobanking management system.

Leslie D McIntosh1, Mukesh K Sharma1, David Mulvihill1

  • 1Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.

Journal of Biomedical Informatics
|September 2, 2015
PubMed
Summary
This summary is machine-generated.

OpenSpecimen is an open-source biospecimen data management software that enhances biorepository data integrity and sharing. Its flexible, interoperable design supports diverse biobanking workflows and research needs globally.

Keywords:
BiobankingBiospecimenDatabasesMedical informaticsSpecimen collectionTissue banks

More Related Videos

Creation and Maintenance of a Living Biobank - How We Do It
13:08

Creation and Maintenance of a Living Biobank - How We Do It

Published on: April 10, 2021

8.2K
Establishment of a Clinic-based Biorepository
07:50

Establishment of a Clinic-based Biorepository

Published on: May 29, 2017

7.0K

Related Experiment Videos

Last Updated: Apr 4, 2026

Biobank for Translational Medicine: Standard Operating Procedures for Optimal Sample Management
08:01

Biobank for Translational Medicine: Standard Operating Procedures for Optimal Sample Management

Published on: November 30, 2022

5.9K
Creation and Maintenance of a Living Biobank - How We Do It
13:08

Creation and Maintenance of a Living Biobank - How We Do It

Published on: April 10, 2021

8.2K
Establishment of a Clinic-based Biorepository
07:50

Establishment of a Clinic-based Biorepository

Published on: May 29, 2017

7.0K

Area of Science:

  • Biomedical Informatics
  • Biobanking Technology
  • Data Management Systems

Background:

  • The National Cancer Institute (NCI) Cancer Biomedical Informatics Grid (caBIG) program developed standards for biorepository data management and biospecimen sharing.
  • caTissue Suite, a biospecimen data management tool, evolved from the caBIG initiative.
  • OpenSpecimen is the open-source evolution of caTissue Suite, focusing on biospecimen data management.

Purpose of the Study:

  • To describe the functionality and evolution of OpenSpecimen, an open-source biospecimen data management software.
  • To highlight OpenSpecimen's capabilities in handling granular, hierarchical data for biorepositories.
  • To emphasize the software's role in facilitating biospecimen resource sharing and research.

Main Methods:

  • OpenSpecimen captures and represents highly granular, hierarchically-structured data for biospecimen processing, quality assurance, tracking, and annotation.
  • It offers a user-interface designed for multi-user, multi-site biorepository environments with role-based access.
  • The software integrates standard vocabularies for interoperability with other bioinformatics tools.

Main Results:

  • OpenSpecimen supports diverse biobanking workflows and user needs through its flexible design.
  • It ensures data integrity, security, and discoverability across applications.
  • The software is globally adopted at over 25 institutions, demonstrating its utility.

Conclusions:

  • OpenSpecimen provides a robust, accessible, and secure solution for biospecimen data management.
  • Its continuous iterative development and user feedback ensure up-to-date capabilities.
  • The open-source nature and interoperability of OpenSpecimen catalyze advances in biomedical research and operations.