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Published on: May 26, 2011
The Ras G Domain Lacks the Intrinsic Propensity to Form Dimers
Elizaveta A Kovrigina1, Azamat R Galiakhmetov1, Evgenii L Kovrigin1
1Chemistry Department, Marquette University, Milwaukee, Wisconsin.
Abstract:
Ras GTPase is a molecular switch controlling a number of cellular pathways including growth, proliferation, differentiation, and apoptosis. Recent reports indicated that Ras undergoes dimerization at the membrane surface through protein-protein interactions. If firmly established this property of Ras would require profound reassessment of a large amount of published data and modification of the Ras signaling paradigm. One proposed mechanism of dimerization involves formation of salt bridges between the two GTPase domains (G domains) leading to formation of a compact dimer as observed in Ras crystal structures. In this work, we interrogated the intrinsic ability of Ras to self-associate in solution by creating conditions of high local concentration through irreversibly tethering the two G domains together at their unstructured C-terminal tails. We evaluated possible self-association in this inverted tandem conjugate via analysis of the time-domain fluorescence anisotropy and NMR chemical shift perturbations. We did not observe the increased rotational correlation time expected for the G domain dimer. Variation of the ionic strength (to modulate stability of the salt bridges) did not affect the rotational correlation time in the tandem further supporting independent rotational diffusion of two G domains. In a parallel line of experiments to detect and map weak self-association of the G domains, we analyzed NMR chemical shifts perturbations at a number of sites near the crystallographic dimer interface. The nearly complete lack of chemical shift perturbations in the tandem construct supported a simple model with the independent G domains repelled from each other by their overall negative charge. These results lead us to the conclusion that self-association of the G domains cannot be responsible for homodimerization of Ras reported in the literature.
Insights
Ras GTPase self-association was investigated. Results indicate Ras GTPase G domains do not inherently dimerize in solution, challenging existing models of Ras signaling pathways.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Signaling
Background:
- Ras GTPase is a key regulator of cellular processes like growth and apoptosis.
- Recent studies suggest Ras dimerization at the membrane, potentially altering signaling paradigms.
Purpose of the Study:
- To investigate the intrinsic self-association ability of Ras GTPase G domains in solution.
- To test the proposed mechanism of Ras dimerization via salt bridges between G domains.
Main Methods:
- Constructing an inverted tandem conjugate of Ras G domains tethered at C-terminal tails.
- Analyzing self-association using time-domain fluorescence anisotropy and NMR chemical shift perturbations.
- Varying ionic strength to assess the role of salt bridges in dimerization.
Main Results:
- No evidence of increased rotational correlation time indicative of G domain dimerization was observed.
- Ionic strength variations did not affect rotational correlation time, supporting independent G domain diffusion.
- NMR chemical shift perturbations were minimal, suggesting G domains are repelled by negative charge, not associating.
Conclusions:
- Ras GTPase G domains do not intrinsically self-associate in solution.
- The proposed salt bridge mechanism is unlikely to drive Ras homodimerization.
- Published data on Ras dimerization may require re-evaluation.
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