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Characterize Disease-related Mutants of RAF Family Kinases by Using a Set of Practical and Feasible Methods
Published on: July 17, 2019
Transcriptional and post-translational modifications of B-Raf in quinol-thioether induced tuberous sclerosis renal
Jennifer D Cohen1,2, Matthew Labenski1,2, Nicholas J Mastrandrea1,2
1Southwest Environmental Health Sciences Center, College of Pharmacy, The University of Arizona, Tucson, Arizona.
Abstract:
Increased activity of B-Raf has been identified in approximately 7% of human cancers. Treatment of Eker rats (Tsc-2(EK/+) ), bearing a mutation in one allele of the tuberous sclerosis-2 (Tsc-2) gene, with the nephrocarcinogen 2,3,5-tris-(glutathion-S-yl) hydroquinone (TGHQ) results in loss of the wild-type allele of Tsc-2 in renal preneoplastic lesions and tumors. These tumors have increased protein expression of B-Raf, C-Raf (Raf-1), and increased expression and activity of ERK kinase. Similar changes are observed in Raf kinases following TGHQ-mediated transformation of primary renal epithelial cells derived from Tsc-2(EK/+) rats (QTRRE cells), cells that are also null for tuberin. Herein, we utilized LC-MS/MS to identify constitutive phosphorylation of S345 and S483 in both 100- and 95-kDa forms of B-Raf in QTRRE cells. Using microRotofor liquid-phase isoelectric focusing, we identified four fractions of B-Raf that contain different post-translational modification profiles in QTRRE cells. Amplification of the kinase domain of B-Raf from QTRRE cells, outer-stripe of the outer medulla of 8-month TGHQ- or vehicle-treated Tsc-2(+/+) and Tsc-2(EK/+) rats, as well as tumors excised from 8-month TGHQ-treated Tsc-2(EK/+) rats revealed three splice variants of B-Raf within the kinase domain. These splice variants differed by approximately 340, 544, and 600 bp; confirmed by sequencing. No point mutations within the kinase domain of B-Raf were identified. In addition, B-Raf/Raf-1/14-3-3 complex formation in the QTRRE cells was decreased by sorafenib, with concomitant selective decreases in p-ERK levels. Transcriptional and post-translational characterization of critical kinases, such as B-Raf, may contribute to the progression of tuberous sclerosis RCC. (246/250) © 2015 Wiley Periodicals, Inc.
Insights
Increased B-Raf activity is linked to cancer. This study investigated B-Raf alterations in tuberous sclerosis-2 related kidney cancer, identifying splice variants and phosphorylation sites that may drive tumor progression.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Increased B-Raf kinase activity is implicated in approximately 7% of human cancers.
- Tuberous sclerosis-2 (Tsc-2) gene mutations are associated with renal cell carcinoma (RCC).
- Nephrocarcinogen treatment of Eker rats leads to Tsc-2 loss and altered Raf kinase signaling.
Purpose of the Study:
- To investigate the transcriptional and post-translational modifications of B-Raf in Tsc-2-deficient renal cancer models.
- To identify B-Raf alterations contributing to tuberous sclerosis-associated RCC.
Main Methods:
- Liquid chromatography-tandem mass spectrometry (LC-MS/MS) for identifying B-Raf phosphorylation.
- MicroRotofor liquid-phase isoelectric focusing to analyze B-Raf post-translational modifications.
- Kinase domain amplification, sequencing, and splice variant analysis in rat models and cell lines.
Main Results:
- Constitutive phosphorylation of B-Raf at S345 and S483 was identified in Tsc-2-null renal cells (QTRRE).
- Four distinct B-Raf fractions with varying post-translational modifications were found.
- Three B-Raf splice variants within the kinase domain were identified; no point mutations were detected. Sorafenib treatment decreased B-Raf/Raf-1/14-3-3 complex formation and p-ERK levels.
Conclusions:
- B-Raf splice variants and specific phosphorylation sites are present in Tsc-2-deficient renal tumors.
- These molecular alterations in B-Raf may play a role in the pathogenesis of tuberous sclerosis-associated RCC.
- Targeting B-Raf signaling could be a potential therapeutic strategy.
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