Related Experiment Video
Updated: Apr 4, 2026

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
BCL2 gene polymorphisms and splicing variants in chronic myeloid leukemia
Vicent Guillem1, Paula Amat1, María Collado1
1Hematology and Medical Oncology Department, Hospital Clínico Universitario, INCLIVA Biomedical Research Institute, Valencia, Spain.
Genetic variations in the BCL2 gene (antiapoptotic gene) do not affect chronic myeloid leukemia (CML) risk but influence disease characteristics. Specific BCL2 single nucleotide polymorphisms (SNPs) correlate with clinical risk profiles in CML patients.
Area of Science:
- Genetics
- Hematology
- Molecular Biology
Background:
- Constitutional genetic variations in the antiapoptotic BCL2 gene are implicated in hematological malignancies.
- Single nucleotide polymorphisms (SNPs) in BCL2 may influence chronic myeloid leukemia (CML) susceptibility and clinical outcomes.
Purpose of the Study:
- To investigate the association between BCL2 SNPs and CML risk.
- To determine if BCL2 polymorphisms influence CML characteristics at diagnosis.
Main Methods:
- Genotyping of four candidate BCL2 SNPs in CML patients and controls.
- Analysis of the association between BCL2 SNPs and CML risk.
- Correlation of BCL2 SNPs with clinical parameters like the Sokal score.
- Assessment of BCL2 alternative splicing transcripts (BCL2-α, BCL2-β) in relation to polymorphisms.
Main Results:
- No significant association was found between the studied BCL2 SNPs and the risk of developing CML.
- Two specific BCL2 SNPs (rs2279115 and rs1801018) were significantly associated with the Sokal score, a disease risk profile.
- These polymorphisms correlated with BCL2 splicing variants in healthy individuals but not in CML patients.
- BCL2 mRNA splicing variant levels changed during the clinical course of CML.
Conclusions:
- BCL2 gene polymorphisms do not appear to influence the susceptibility to CML.
- Specific BCL2 SNPs are associated with clinical features of CML at diagnosis.
- The underlying pathogenic mechanisms linking BCL2 polymorphisms to CML clinical characteristics require further investigation.
Related Concept Videos
RNA Splicing
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Alternative RNA Splicing
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
Pharmacogenetics of Drug Targets: β₂-Adrenergic Receptors, Apo E, Thymidylate Synthase
Pharmacogenetics of Drug Transporters: P-Glycoprotein and Solute Carrier Transporters
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...

