Related Experiment Video
Updated: Apr 4, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
Marta Pérez-Sancho1, Ana Isabel Vela2, Teresa García-Seco3
1Centro de Vigilancia Sanitaria Veterinaria (VISAVET), Universidad Complutense , Madrid , Spain ; Campus de Excelencia Internacional (CEI) Moncloa, Universidad Politécnica de Madrid (UPM), Universidad Complutense de Madrid (UCM) , Madrid , Spain.
Abstract:
The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values ≥2.300 and 79 isolates (61.24%) gave score values between 2.299 and 2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7, and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of ≥2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis.
Insights
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) accurately identifies Streptococcus suis. Updating the database and lowering the score threshold improved identification rates to 96.9%.
Area of Science:
- Microbiology
- Veterinary Diagnostics
- Mass Spectrometry
Background:
- Streptococcus suis is a significant zoonotic pathogen.
- Accurate identification of S. suis is crucial for disease control in animal and human health.
- Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid identification method.
Purpose of the Study:
- To evaluate the accuracy of MALDI-TOF MS for S. suis identification.
- To compare MALDI-TOF MS with PCR and a commercial identification system.
- To optimize the MALDI-TOF MS identification criteria for S. suis.
Main Methods:
- PCR-based assay used as the gold standard for S. suis identification.
- MALDI-TOF MS analysis of S. suis isolates from various sources.
- Comparison of MALDI-TOF MS results with the Rapid ID 32 STREP system.
- Database update for MALDI-TOF MS with new S. suis spectra.
Main Results:
- Initial MALDI-TOF MS identification showed variable accuracy with standard thresholds.
- Updating the S. suis database significantly increased mean score values.
- A reduced threshold score (≥2.000) with the updated database correctly identified 96.9% of isolates.
- MALDI-TOF MS demonstrated excellent performance for S. suis identification.
Conclusions:
- MALDI-TOF MS is a reliable and efficient method for S. suis identification.
- Optimizing the database and adjusting the score threshold enhances accuracy.
- MALDI-TOF MS offers a valuable alternative to traditional methods for S. suis diagnostics.
More Related Videos
Related Concept Videos
MALDI-TOF Mass Spectrometry
Peptide Identification Using Tandem Mass Spectrometry
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
Modern Molecular Taxonomy

