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LncReg: a reference resource for lncRNA-associated regulatory networks
Zhong Zhou1, Yi Shen1, Muhammad Riaz Khan2
1School of Information Science and Technology, Centers for Biomedical Engineering and.
Database : the Journal of Biological Databases and Curation
|September 13, 2015
Summary
Researchers created LncReg, a database of long non-coding RNA (lncRNA) regulatory interactions. This resource simplifies understanding lncRNA functions and networks for bioinformatics research.
Area of Science:
- Genomics
- Molecular Biology
- Bioinformatics
Background:
- Long non-coding RNAs (lncRNAs) play crucial roles in biological regulation.
- The increasing number of identified lncRNAs and their complex regulatory roles create literature challenges for researchers.
Purpose of the Study:
- To consolidate and present validated lncRNA regulatory relationships.
- To develop a user-friendly database, LncReg, for easier access to lncRNA data.
- To facilitate bioinformatics research and understanding of lncRNA functions.
Main Methods:
- Curated a database of 1081 validated lncRNA-associated regulatory entries.
- Included 258 non-redundant lncRNAs and 571 non-redundant genes in the dataset.
- Developed the LncReg database accessible online.
Main Results:
- Established LncReg with a comprehensive collection of lncRNA regulatory data.
- The database contains validated interactions, offering insights into regulatory networks.
- Provides a valuable resource for studying lncRNA functional roles.
Conclusions:
- LncReg offers a centralized platform for lncRNA regulatory information.
- The database aids researchers in navigating the complexity of lncRNA literature.
- Facilitates comprehensive bioinformatics analysis and functional studies of lncRNAs.
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