Review structure- and dynamics-based computational design of anticancer drugs
Related Experiment Video
Updated: Apr 3, 2026

Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors
Published on: May 9, 2025
Jung Hsin Lin1,2,3
1Research Center for Applied Sciences, Academia Sinica, Taipei, Taiwan.
Abstract:
Cancer is a class of highly complex diseases involving multiple genes and multiple cross-talks between signaling networks. Cancer cells may be developed from inherited defects or acquired damages of DNA. However, many cancers are resistant to treatment, and metastasis of cancers makes the disease even more intractable. Secondary malignancies are frequently observed after cancer chemotherapy. The call for more effective cancer therapy is obligatory. Using drug-cocktails that combine multiple anti-cancer agents working in different mechanisms has been a standard treatment of cancers to overcome the drug resistance problem. More recently, design of multiple ligands (may be more easily understood as "multiple target ligands"), i.e., single agents that target multiple biomolecules in a rational manner, receives increasing attention. For those who work on computational drug design, such tasks serve as new opportunities for achieving drugs with more effective pharmacological actions, in addition to designing compounds with better binding affinity, better selectivity, or to discovering compounds that can exert their actions allosterically. Some recent methodological developments on computational drug design are reviewed, and a few recent drug design efforts on a selected set of targets (topoisomerases, Ras proteins, protein kinases, and histone deacetylases) toward cancer treatment and cancer prevention are summarized.
Insights
Developing novel cancer therapies is crucial due to treatment resistance and metastasis. This study explores computational drug design for multi-target ligands to create more effective anti-cancer agents.
Area of Science:
- Oncology
- Computational Chemistry
- Drug Design
Background:
- Cancer is a complex disease driven by genetic alterations, often leading to treatment resistance and metastasis.
- Existing treatments like drug-cocktails face challenges, necessitating innovative therapeutic strategies.
- Secondary malignancies post-chemotherapy highlight the urgent need for more effective cancer treatments.
Purpose of the Study:
- To review recent advancements in computational drug design methodologies.
- To summarize drug design efforts targeting multiple biomolecules for cancer treatment and prevention.
- To explore the potential of multi-target ligands in overcoming cancer drug resistance.
Main Methods:
- Review of computational drug design techniques.
- Analysis of drug design strategies for multi-target ligands.
- Summary of recent drug design efforts on key cancer targets.
Main Results:
- Computational drug design offers new avenues for developing drugs with enhanced efficacy and selectivity.
- Multi-target ligands represent a promising approach to combat cancer drug resistance.
- Recent efforts focus on targets like topoisomerases, Ras proteins, protein kinases, and histone deacetylases.
Conclusions:
- Computational drug design is pivotal in creating next-generation anti-cancer therapies.
- Multi-target ligand design holds significant potential for improving cancer treatment outcomes.
- Targeting multiple biomolecules offers a rational approach to combat complex cancers.
More Related Videos
08:49Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis
Published on: June 20, 2025
10:33Development of Inhibitors of Protein-protein Interactions through REPLACE: Application to the Design and Development Non-ATP Competitive CDK Inhibitors
Published on: October 26, 2015
Related Concept Videos
Structure-Activity Relationships and Drug Design
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
Adaptive Mechanisms in Cancer Cells
Adaptive Mechanisms in Cancer Cells
Some of the advantages that cancer cells have on normal cells include - enhanced ability to divide without terminally differentiating, induce new blood vessel formation,...
Targets for Drug Action: Overview
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
Drug Discovery: Overview
Combination Therapies and Personalized Medicine
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...