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Updated: Apr 3, 2026

Detecting Somatic Genetic Alterations in Tumor Specimens by Exon Capture and Massively Parallel Sequencing
Published on: October 18, 2013
An overview of the NCI precision medicine trials-NCI MATCH and MPACT
Khanh Do1, Geraldine O'Sullivan Coyne2, Alice P Chen3
1Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Abstract:
The concept of oncogene addiction was first proposed by Weinstein in 2002, postulating that tumors rely on a single dominant mutation, the oncogenic "driver", for growth and survival. We have since come to realize that the genomic landscape of tumors is heterogeneous and more complex than previously thought. Advances in biotechnology and bioinformatics over the past decade have shifted treatment paradigms with regard to the development of molecular targeted therapeutics to identify and target the presumptive dominant lesion. As such, the decision of choosing targeted treatment strategies has become increasingly more reliant on the reporting of genomic screens of patients' tumor tissue. Whether this change in treatment paradigm will translate into improved clinical benefit, remains to be seen. To this end, the United States National Cancer Institute (NCI) has launched precision-based medicine trials to address this question. NCI Molecular Analysis for Therapy Choice (MATCH), a genomic pre-screening study, was designed to explore the efficacy of using targeted agents to target specific molecular aberrations and whether these same therapies have comparable activity across different tumor subtypes. Molecular Profiling-based Assignment of Cancer Therapy (MPACT), is a smaller, provocative trial designed to address whether targeting an oncogenic "driver" would be more efficacious than one not. The Exceptional Responders' initiative further aims to evaluate patients who have derived an unexpected durable benefit to these therapies, with retrospective analysis of their tumors to delineate potential predictive biomarkers which could predict response. The results of these trials will serve to help guide the field of precision medicine and personalized care.
Insights
Tumor genomic complexity challenges the oncogene addiction theory. Precision medicine trials like NCI MATCH and MPACT investigate targeted therapies and biomarkers for improved cancer treatment outcomes.
Area of Science:
- Oncology
- Genomics
- Molecular Biology
Background:
- The oncogene addiction theory proposed tumors rely on a single "driver" mutation.
- Tumor genomic landscapes are now understood to be complex and heterogeneous.
- Advances in biotechnology and bioinformatics have driven the development of targeted therapeutics.
Purpose of the Study:
- To evaluate the efficacy of targeted therapies in cancer treatment.
- To determine if targeting specific molecular aberrations improves clinical benefit.
- To explore the utility of genomic profiling in guiding treatment strategies.
Main Methods:
- The National Cancer Institute (NCI) launched precision medicine trials, including NCI Molecular Analysis for Therapy Choice (MATCH) and Molecular Profiling-based Assignment of Cancer Therapy (MPACT).
- These trials involve genomic pre-screening of tumor tissue to identify molecular aberrations.
- The Exceptional Responders initiative analyzes tumors from patients with durable responses to identify predictive biomarkers.
Main Results:
- Genomic screens of patient tumor tissue are increasingly relied upon for treatment decisions.
- The clinical benefit of targeted treatment strategies is still under evaluation.
- Ongoing trials aim to elucidate the efficacy of targeting specific oncogenic drivers across different tumor subtypes.
Conclusions:
- Results from NCI MATCH, MPACT, and the Exceptional Responders initiative will guide the field of precision medicine.
- Understanding tumor heterogeneity is crucial for developing effective personalized cancer care.
- Identifying predictive biomarkers is essential for optimizing targeted therapy selection and improving patient outcomes.
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