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Genetic code flexibility in microorganisms: novel mechanisms and impact on physiology
Jiqiang Ling1, Patrick O'Donoghue2,3, Dieter Söll4,5
1Department of Microbiology and Molecular Genetics, University of Texas Health Science Center, Houston, Texas 77030, USA.
Nature Reviews. Microbiology
|September 29, 2015
Summary
The genetic code is not universal, with variations like codon reassignment common in microorganisms. These genetic code flexibilities significantly impact microbial physiology and evolution.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- The genetic code was historically considered universal and immutable.
- Recent advances in sequencing, biochemistry, bioinformatics, and structural biology have revealed significant variations.
- These variations include biased codon usage, codon reassignment, ambiguous decoding, and recoding.
Purpose of the Study:
- To review the prevalence, evolution, and mechanistic basis of genetic code variations in microorganisms.
- To discuss the physiological implications of genetic code flexibility in microbes.
Main Methods:
- Review of recent literature in genome sequencing, biochemistry, bioinformatics, and structural biology.
- Analysis of data on genetic code variations in microbial systems.
- Discussion of evolutionary and mechanistic aspects.
Main Results:
- Genetic code variations are prevalent in microorganisms.
- These variations have evolved through various mechanisms.
- Genetic code flexibility demonstrably affects microbial physiology.
Conclusions:
- The genetic code exhibits substantial flexibility, particularly in microorganisms.
- Understanding these variations is crucial for comprehending microbial life and evolution.
- Genetic code flexibility plays a key role in microbial adaptation and function.
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