NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy
Mahsa Silatani1, Frederico A Lima1, Thomas J Penfold2
1Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide and Lausanne Centre for Ultrafast Science (LACUS), Institut des Sciences et Ingeniérie Chimiques (ISIC), CH-1015 Lausanne, Switzerland;
Abstract:
Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein's function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼ 200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump-probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center.
More Related Videos
Related Concept Videos
The Equilibrium Binding Constant and Binding Strength
Gene Families
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Protein-Drug Binding: Mechanism and Kinetics
Various forces drive these interactions, including hydrogen bonds, hydrophobic interactions, ionic bonds, electrostatic interactions, and van der Waals forces. These bonds enable drugs to bind to specific sites on proteins,...
Protein Dynamics in Living Cells
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Physiological Pharmacokinetic Models: Assumption with Protein Binding
Molecular Spectroscopy: Absorption and Emission


