Genetic sharing and heritability of paediatric age of onset autoimmune diseases

Yun R Li1,2, Sihai D Zhao3, Jin Li1

  • 1Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania 19104, USA.

Nature Communications
|October 10, 2015
PubMed

Insights

This study quantifies the heritability of pediatric autoimmune diseases (pAIDs) using genomic variations. It reveals significant genetic contributions for Type 1 Diabetes and Juvenile Idiopathic Arthritis, uncovering shared genetic risks among pAIDs.

Area of Science:

  • Genetics
  • Immunology
  • Pediatrics

Background:

  • Autoimmune diseases (AIDs) are polygenic conditions affecting 7-10% of the Western Hemisphere population.
  • Effective therapies for AIDs remain limited, necessitating further research into their genetic underpinnings.
  • Paediatric AIDs (pAIDs) represent a significant subset of these complex diseases.

Purpose of the Study:

  • To quantify the heritability of various pAIDs attributable to common genomic variations (SNP-h²).
  • To identify shared and disease-specific genomic variations contributing to pAID heritability.
  • To explore correlations and genetic risk sharing among different pAIDs.

Main Methods:

  • Utilized SNP-h² to estimate the heritability of pAIDs, including JIA, SLE, CEL, T1D, UC, CD, PS, SPA, and CVID.
  • Performed pairwise analysis to determine correlations between different autoimmune diseases.
  • Investigated the contribution of Major Histocompatibility Complex (MHC) variations to heritability estimates.

Main Results:

  • Significant SNP-h² estimates were observed for Type 1 Diabetes (T1D) (0.863) and Juvenile Idiopathic Arthritis (JIA) (0.727).
  • Modest heritability was found for Ulcerative Colitis (UC) (0.386) and Crohn's Disease (CD) (0.454).
  • Strongest correlations were found between UC-CD (0.69) and JIA-CVID (0.343), indicating shared genetic risks.

Conclusions:

  • Common genomic variations significantly contribute to the heritability of pAIDs.
  • Identified unexpected shared genetic risks among pAIDs, particularly between UC and CD, and JIA and CVID.
  • Results partition genomic contributions, differentiating shared and disease-specific variations in pAID heritability.

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