Expression screening using a Medaka cDNA library identifies evolutionarily conserved regulators of the p53/Mdm2

Ping Zhang1,2,3, Anne Sophie Kratz4,5, Mohammed Salama6

  • 1Institute of Toxicology and Genetics, Karlsruhe Institute of Technology, 76021, Karlsruhe, Germany. ping.zhang@ludwig.ox.ac.uk.

BMC Biotechnology
|October 10, 2015
PubMed
Abstract

Insights

Researchers screened for new regulators of the p53/Mdm2 pathway using a Medaka cDNA library. This identified conserved proteins that alter p53 and Mdm2 levels, advancing our understanding of this critical cellular circuit.

Area of Science:

  • Molecular Biology
  • Genetics
  • Cancer Research

Background:

  • The p53 tumor suppressor protein's stability is primarily controlled by its half-life, influencing cellular levels.
  • Mdm2 is the main ubiquitin ligase targeting p53 for proteasomal degradation.
  • Existing knowledge on p53/Mdm2 regulation is incomplete, with ongoing discovery of new interacting proteins and ubiquitin ligases.

Purpose of the Study:

  • To identify evolutionarily conserved regulators of the p53/Mdm2 pathway using a cell culture-based overexpression screen.
  • To enhance the understanding of how p53 and Mdm2 protein abundance and Mdm2 activity are regulated.

Main Methods:

  • A large-scale overexpression screen was performed in H1299 cells using a Medaka cDNA library.
  • Co-transfection with p53, Mdm2, and Ror2 (internal control) was followed by SDS-PAGE/Western Blot analysis.
  • Identified Medaka genes were tested for their human orthologues' effects on p53/Mdm2 abundance.

Main Results:

  • Over one hundred hits altering p53, Mdm2, or both protein levels were identified in the primary screen.
  • Subscreening revealed several potential novel regulators of the p53/Mdm2 pathway.
  • Human orthologues of identified Medaka genes confirmed conserved regulatory functions, validating the screening methodology.

Conclusions:

  • Numerous unknown regulators of p53 and Mdm2 abundance are predicted to exist.
  • A cross-species screening approach effectively identified evolutionarily conserved regulators.
  • The Medaka unigene cDNA library is a valuable tool for discovering novel regulators in the p53/Mdm2 pathway.

Related Concept Videos

Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the...
5.4K
Negative Regulator Molecules01:23

Negative Regulator Molecules

Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
38.9K
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
7.9K
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
8.0K
Cis-regulatory Sequences02:02

Cis-regulatory Sequences

Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
12.2K