Related Experiment Video
Updated: Apr 1, 2026

Mass Spectrometry Analysis to Identify Ubiquitylation of EYFP-tagged CENP-A EYFP-CENP-A
Published on: June 10, 2020
Structural Analysis of the Pin1-CPEB1 interaction and its potential role in CPEB1 degradation
Constanze Schelhorn1, Pau Martín-Malpartida1, David Suñol1
1Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 10, Barcelona, 08028, Spain.
Abstract:
The Cytoplasmic Polyadenylation Element Binding proteins are RNA binding proteins involved in the translational regulation of mRNA. During cell cycle progression, CPEB1 is labeled for degradation by phosphorylation-dependent ubiquitination by the SCF(β-TrCP) ligase. The peptidyl-prolyl isomerase Pin1 plays a key role in CPEB1 degradation. Conditioned by the cell cycle stage, CPEB1 and Pin1 interactions occur in a phosphorylation-independent or -dependent manner. CPEB1 contains six potential phosphorylatable Pin1 binding sites. Using a set of biophysical techniques, we discovered that the pS210 site is unique, since it displays binding activity not only to the WW domain but also to the prolyl-isomerase domain of Pin1. The NMR structure of the Pin1 WW-CPEB1 pS210 (PDB ID: 2n1o) reveals that the pSerPro motif is bound in trans configuration through contacts with amino acids located in the first turn of the WW domain and the conserved tryptophan in the β3-strand. NMR relaxation analyses of Pin1 suggest that inter-domain flexibility is conferred by the modulation of the interaction with peptides containing the pS210 site, which is essential for degradation.
Insights
The peptidyl-prolyl isomerase Pin1 targets the Cytoplasmic Polyadenylation Element Binding protein 1 (CPEB1) for degradation. Unique binding at the pS210 site of CPEB1 by Pin1
Area of Science:
- Molecular Biology
- RNA Biology
- Protein Degradation
Background:
- Cytoplasmic Polyadenylation Element Binding proteins (CPEB) regulate mRNA translation.
- CPEB1 degradation is crucial for cell cycle progression and is mediated by SCF(β-TrCP) ligase.
- The peptidyl-prolyl isomerase Pin1 is implicated in CPEB1 degradation.
Purpose of the Study:
- To investigate the molecular mechanism of CPEB1 degradation by Pin1.
- To elucidate the role of specific phosphorylation sites on CPEB1 in Pin1 interaction.
- To characterize the structural basis of the CPEB1-Pin1 interaction.
Main Methods:
- Biophysical techniques including Nuclear Magnetic Resonance (NMR) spectroscopy.
- Structural analysis of the Pin1 WW-CPEB1 pS210 complex (PDB ID: 2n1o).
- NMR relaxation analyses to study protein dynamics.
Main Results:
- CPEB1 interacts with Pin1 in a phosphorylation-dependent or -independent manner.
- The pS210 site on CPEB1 uniquely binds to both the WW and prolyl-isomerase domains of Pin1.
- Structural data reveals the pSerPro motif of CPEB1 binds in a trans configuration within the Pin1 WW domain.
- Pin1 inter-domain flexibility is modulated by interaction with pS210-containing peptides, facilitating degradation.
Conclusions:
- The pS210 site of CPEB1 is a critical determinant for Pin1-mediated degradation.
- Pin1's dual-domain interaction with CPEB1's pS210 site is essential for regulating CPEB1 stability.
- Understanding this interaction provides insights into cell cycle control and mRNA translational regulation.
Related Concept Videos
Export of Misfolded Proteins out of the ER
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Regulation of the Unfolded Protein Response
The Unfolded Protein Response
The Proteasome
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...

