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Published on: May 4, 2018
Purification and characterization of a methionine-specific aminopeptidase from Salmonella typhimurium
P Wingfield1, P Graber, G Turcatti
1Biogen S.A., Geneva, Switzerland.
Abstract:
An aminopeptidase specific for methionine (peptidase M) has been purified from wild-type and mutant Salmonella typhimurium strains. Recombinant peptidase M was also purified from Escherichia coli. These preparations were characterized with respect to their physicochemical properties using analytical ultracentrifugation, SDS/PAGE, isoelectric focusing, titration curve analysis, amino acid analysis, N-and C-terminal sequencing and various spectroscopic methods. Peptidase M activity is stimulated by Co2+, in agreement with previous studies using crude extracts of Salmonella. The purified preparations did not contain significant amounts of any metal. Enzymically important metal is loosely associated and lost during enzyme purification. Peptidase M was shown to contain seven free sulphydryl residues none of which are involved in either intra-or inter-molecular disulphide bonds. Most appear solvent-accessible as evidenced by their reactivity under native conditions. Limited modification of the sulphydryl residues with either iodoacetamide or 5,5'-dithiobis(2-nitrobenzoic acid) led to inactivation. Several cysteines were shown to be labelled to various degrees by peptide mapping of inactivated S-[14C]carboxymethylated protein. Whether cysteine modification affects enzymic activity directly (blocking an active site) or indirectly (by causing conformational change) remains to be established.
Insights
Methionine aminopeptidase (peptidase M) was purified and characterized. Its activity is cobalt-dependent, and modification of free sulfhydryl groups inactivates the enzyme, suggesting cysteine
Area of Science:
- Biochemistry
- Enzymology
- Microbiology
Background:
- Methionine aminopeptidase (peptidase M) plays a role in protein processing.
- Understanding peptidase M's structure and function is crucial for cellular processes.
Purpose of the Study:
- To purify and characterize peptidase M from Salmonella typhimurium and Escherichia coli.
- To investigate the role of metal ions and sulfhydryl groups in peptidase M activity.
Main Methods:
- Purification of wild-type and mutant Salmonella typhimurium peptidase M.
- Recombinant peptidase M purification from Escherichia coli.
- Physicochemical characterization using analytical ultracentrifugation, SDS/PAGE, isoelectric focusing, amino acid analysis, sequencing, and spectroscopy.
- Enzyme activity assays and chemical modification studies.
Main Results:
- Peptidase M activity is stimulated by Co2+ but purified enzyme lacks significant metal content.
- Seven free sulfhydryl residues were identified, with most being solvent-accessible.
- Modification of sulfhydryl groups with iodoacetamide or DTNB led to enzyme inactivation.
Conclusions:
- Enzymically important metal is loosely associated and lost during purification.
- Free sulfhydryl groups are essential for peptidase M activity, potentially through direct active site involvement or conformational changes.
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