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Published on: March 22, 2024
Microbial diversity on intravascular catheters from paediatric patients
Insights
Understanding intravascular catheter (IVC) biofilms is crucial for managing infections in children. This study reveals IVC microbiota composition is primarily linked to catheter dwell time, not patient factors or catheter type.
Area of Science:
- Microbiology
- Infectious Diseases
- Pediatrics
Background:
- Intravascular catheter (IVC)-related infections are serious complications in pediatric patients, leading to increased morbidity and mortality.
- Effective management of these infections requires a deeper understanding of the microbial communities colonizing IVCs.
Purpose of the Study:
- To systematically evaluate the bacteriology of IVC biofilms using culture-independent methods.
- To characterize the microbial composition within various types of pediatric IVCs.
Main Methods:
- Analysis of 24 pediatric IVC samples (peripherally inserted central catheters, central venous catheters, arterial catheters) from patients aged 0-14 years.
- Utilized barcoded amplicon libraries targeting 16S rRNA genes and roll-plate culture for microbial identification.
- High-throughput sequencing generated over 1 million high-quality reads, identifying 8 phyla and 136 genera across 12,224 operational taxonomic units (OTUs).
Main Results:
- Actinobacteria, Firmicutes, and Proteobacteria were the predominant phyla, with Firmicutes constituting nearly half of all detected OTUs.
- Staphylococcus, Streptococcus, and Bacillus were the most common genera within the Firmicutes phylum.
- Microbial community composition was not significantly influenced by patient age, gender, antibiotic use, or catheter type.
Conclusions:
- Catheter dwell time, rather than IVC type or patient characteristics, appears to be the primary driver of differences in IVC microbiota.
- These findings highlight the importance of dwell time in the development of IVC-related infections and inform strategies for infection prevention and management.
Abstract:
Microorganisms play important roles in intravascular catheter (IVC)-related infections, which are the most serious complications in children with IVCs, leading to increased hospitalisation, intensive care admissions, extensive antibiotic treatment and mortality. A greater understanding of bacterial communities is needed in order to improve the management of infections. We describe here the systematic culture-independent evaluation of IVC bacteriology in IVC biofilms. Twenty-four IVC samples (six peripherally inserted central catheters, eight central venous catheters and ten arterial catheters) were collected from 24 paediatric patients aged 0 to 14 years old. Barcoded amplicon libraries produced from genes coding 16S rRNA and roll-plate culture methods were used to determine the microbial composition of these samples. From a total of 1,043,406 high-quality sequence reads, eight microbial phyla and 136 diverse microbial genera were detected, separated into 12,224 operational taxonomic units (OTUs). Three phyla (Actinobacteria, Firmicutes and Proteobacteria) predominate the microorganism on the IVC surfaces, with Firmicutes representing nearly half of the OTUs found. Among the Firmicutes, Staphylococcus (15.0% of 16S rRNA reads), Streptococcus (9.6%) and Bacillus (6.1%) were the most common. Community composition did not appear to be affected by patients' age, gender, antibiotic treatment or IVC type. Differences in IVC microbiota were more likely associated with events arising from catheter dwell time, rather than the type of IVC used.
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