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Updated: Mar 31, 2026

Preparing Protein Producing Synthetic Cells using Cell Free Bacterial Extracts, Liposomes and Emulsion Transfer
Published on: April 27, 2020
Markus Basan1, Manlu Zhu2, Xiongfeng Dai2
1Institute of Molecular Systems Biology, ETH Zürich, Zürich, Switzerland basan@imsb.biol.ethz.ch hwa@ucsd.edu.
This study explores how protein synthesis affects the size and division of Escherichia coli cells. Researchers found that when cells produce large amounts of non-functional proteins, they become significantly larger than cells limited by nutrients. Despite this size increase, the cells' density remains unchanged. The study also found that DNA content rises in these cells, suggesting a link between protein synthesis and replication control. These findings challenge the idea that growth rate alone determines cell size and highlight the role of protein production in regulating division.
Area of Science:
Background:
It is well established that Escherichia coli cell size correlates with growth rate under nutrient conditions. However, the mechanisms governing this relationship remain unclear. Researchers have long sought to determine how cells maintain size homeostasis across varying growth rates. While nutrient limitation is a known factor, the role of protein synthesis in this process has not been fully explored. This gap motivated the investigation of cell size dynamics under different growth constraints. The study aimed to distinguish between the effects of nutrient limitation and protein synthesis on cell size and composition. Prior research has shown that cells grow larger when nutrients are scarce, but the impact of excess protein production is less understood. This paper introduces a novel approach to test how synthetic protein burden alters cell size and division.
Purpose Of The Study:
The primary aim of the study was to investigate how protein synthesis influences cell size and division in Escherichia coli. The researchers sought to determine whether protein production could override the typical relationship between growth rate and cell size. By manipulating protein synthesis independently of nutrient availability, they aimed to isolate its impact on cellular homeostasis. The study aimed to test whether excessive protein synthesis could lead to abnormal cell size increases. The researchers also wanted to assess how DNA content changes under these conditions. Understanding these dynamics could clarify how cells regulate division under synthetic stress. The study focused on the interplay between protein burden and cell cycle progression. This work aimed to reveal new insights into the mechanisms controlling bacterial cell size.
Main Methods:
The researchers used Escherichia coli cells engineered to synthesize large amounts of non-functional proteins. They compared these cells to those limited by nutrient availability rather than protein synthesis. Cell size and mass were measured using fluorescence-based techniques and microscopy. Growth rates were tracked under controlled culture conditions. DNA content was quantified using fluorescent dyes and flow cytometry. Dry mass density was assessed through refractive index measurements. The study employed orthogonal growth limitations to distinguish the effects of protein synthesis from nutrient scarcity. Data were analyzed to determine correlations between protein synthesis, growth rate, and cell size.
Main Results:
Cells producing large amounts of non-functional proteins grew significantly larger than those under nutrient limitation. These cells were 7- to 8-fold larger despite similar growth rates. DNA content increased 3- to 4-fold in these cells, reaching up to eight copies per cell. Despite the size increase, dry mass density remained unchanged. This suggests that cell expansion was not due to increased density but volume. Protein synthesis thus appears to override normal size control mechanisms. The findings indicate that protein burden can alter cell division timing. These results challenge the assumption that growth rate alone dictates cell size.
Conclusions:
The study demonstrates that protein synthesis can significantly alter cell size and DNA content in Escherichia coli. The authors propose that protein burden disrupts normal size control mechanisms. This suggests that cell division is not solely regulated by growth rate. The findings imply that protein synthesis plays a key role in division timing. The researchers observed that DNA content increases under synthetic stress. This indicates a possible link between protein burden and replication control. The results suggest that cells can expand in size without increasing density. These conclusions highlight the importance of protein synthesis in bacterial homeostasis.
Cells producing large amounts of non-functional proteins were 7- to 8-fold larger than those under nutrient limitation.
DNA content increased 3- to 4-fold in cells with high protein synthesis, reaching up to eight copies per cell.
Despite larger size, dry mass density remained constant, suggesting volume expansion rather than density increase.
Cells were engineered to synthesize non-functional proteins or were limited by nutrient availability.
The findings suggest protein synthesis can override normal size control mechanisms and alter division timing.
The researchers propose that DNA replication may be linked to protein synthesis in controlling cell division.