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Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Clinical perspectives on echinocandin resistance among Candida species
Ryan K Shields1, M Hong Nguyen, Cornelius J Clancy
1aDepartment of Medicine, University of Pittsburgh bVA Pittsburgh Healthcare System, Pittsburgh, Pennsylvania, USA.
Purpose Of Review:
We review and offer our clinical perspectives on the emergence of echinocandin-resistant Candida.
Recent Findings:
Candida FKS gene mutations attenuate echinocandin activity, but overall mutation rates among clinical isolates remain low (Candida glabrata, ∼4%; other species, <1%). Rates are higher with prior echinocandin exposure, exceeding 50% among C. glabrata or Candida albicans isolates causing breakthrough invasive candidiasis. The median duration of prior echinocandin exposure among FKS mutant isolates is ∼100 days. The clinical usefulness of echinocandin susceptibility testing is limited by the low overall prevalence of resistance, and uncertainties surrounding testing methods and interpretation of minimum inhibitory concentrations (MICs). In single-center studies, caspofungin resistance (defined using institution-specific MIC breakpoints) was 32-53% sensitive and 75-95% specific for predicting treatment outcomes of C. glabrata invasive candidiasis; corresponding values for the presence of an FKS mutation were 35-41% and 90-98%. Results were similar using anidulafungin and micafungin MICs. Clinical data are scarce for non-C. glabrata species.
Summary:
Echinocandins remain preferred agents against invasive Candida infections. Susceptibility testing and FKS genotypic testing do not have roles in routine clinical practice, but may be useful in newly-diagnosed patients who are echinocandin-experienced or those who have not responded to echinocandin treatment.
Insights
Echinocandin resistance in Candida is uncommon but rises with prior drug exposure. Routine susceptibility testing is not recommended, but may aid specific patient groups.
Area of Science:
- Mycology
- Infectious Diseases
- Antimicrobial Resistance
Background:
- Echinocandins are crucial for invasive Candida infections.
- Emergence of echinocandin resistance is a growing concern.
- FKS gene mutations are the primary mechanism of resistance.
Purpose of the Study:
- To review and provide clinical perspectives on echinocandin-resistant Candida.
- To assess the clinical utility of susceptibility testing and genotypic testing.
Main Methods:
- Review of clinical data and studies on echinocandin resistance.
- Analysis of FKS gene mutation rates in clinical Candida isolates.
- Evaluation of echinocandin susceptibility testing performance.
Main Results:
- Low overall rates of FKS mutations (C. glabrata ~4%, others <1%).
- Higher mutation rates (>50%) in breakthrough infections with prior echinocandin exposure (median ~100 days).
- Limited clinical utility of susceptibility testing due to low prevalence and interpretation uncertainties.
Conclusions:
- Echinocandins remain first-line agents for invasive candidiasis.
- Routine susceptibility and FKS genotypic testing are not advised.
- Testing may benefit echinomycin-experienced or non-responsive patients.
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