Related Experiment Video
Updated: Mar 30, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Human Obesity Associated with an Intronic SNP in the Brain-Derived Neurotrophic Factor Locus
Zongyang Mou1, Thomas M Hyde2, Barbara K Lipska3
1Unit on Metabolism and Neuroendocrinology, Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD), NIH, Bethesda, MD 20892, USA; Section on Growth and Obesity, Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD), NIH, Bethesda, MD 20892, USA.
A specific gene variant (rs12291063 CC) is linked to lower brain-derived neurotrophic factor (BDNF) and increased obesity. This finding suggests BDNF therapy could target obesity in individuals with this genotype.
Area of Science:
- Neuroscience
- Genetics
- Metabolism
Background:
- Brain-derived neurotrophic factor (BDNF) is crucial for regulating energy balance.
- Single nucleotide polymorphisms (SNPs) in the BDNF gene are associated with obesity, but the underlying mechanisms remain unclear.
Purpose of the Study:
- To investigate the association between human hypothalamic BDNF expression and 44 BDNF SNPs.
- To elucidate the molecular mechanism linking BDNF genetic variants to obesity.
Main Methods:
- Analysis of human hypothalamic BDNF expression in relation to 44 BDNF SNPs.
- Genotyping and assessment of adiposity in adult and pediatric cohorts.
- Investigation of allele-specific transcriptional regulation involving heterogeneous nuclear ribonucleoprotein D0B (hnRNP-D0B).
Main Results:
- The minor C allele of rs12291063 was significantly associated with reduced hypothalamic BDNF expression (p < 0.001).
- Carriage of the rs12291063 C allele correlated with increased adiposity in both adult and pediatric populations (p < 0.05).
- The major T allele of rs12291063 binds hnRNP-D0B, a process essential for its transactivation; this binding and transactivation are impaired by the C allele.
Conclusions:
- The rs12291063 SNP influences hypothalamic BDNF expression and adiposity.
- Genetic variations in BDNF can mechanistically contribute to obesity development.
- Targeted BDNF augmentation may be a viable therapeutic strategy for obesity in individuals with the rs12291063 CC genotype.
More Related Videos
Related Concept Videos
Human Genetics
The complex relationship between genetics and psychology is observable through common biological components such...
Single Nucleotide Polymorphisms-SNPs
Obesity
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Incomplete Dominance
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...

