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DNA translocation through single-layer boron nitride nanopores
Zonglin Gu1, Yuanzhao Zhang, Binquan Luan
1School for Radiological and Interdisciplinary Sciences (RAD-X) and Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education Institutions, Soochow University, Suzhou, 215123, China.
Soft Matter
|November 6, 2015
Summary
Boron nitride nanopores offer a new avenue for biological sensing. Simulations show they can distinguish DNA sequences and enable smoother, stall-free translocation for next-generation sequencing devices.
Area of Science:
- Materials Science
- Nanotechnology
- Biophysics
Background:
- Ultra-thin nanopores are crucial for high-resolution biological sensing.
- Two-dimensional materials like graphene are explored for nanopore fabrication.
- Boron nitride (BN) presents a novel 2D material alternative for nanopore applications.
Purpose of the Study:
- To investigate the feasibility of using atomic-thickness boron nitride (BN) for nanopore fabrication.
- To simulate and analyze the dynamics of double-stranded DNA (dsDNA) translocation through BN nanopores.
- To assess the potential of BN nanopores for DNA sequencing applications.
Main Methods:
- All-atom molecular dynamics simulations were employed.
- The translocation of dsDNA through BN nanopores was modeled.
- Ionic current blockages were analyzed to differentiate DNA sequences.
Main Results:
- Boron nitride (BN) nanopores can be fabricated with atomic thickness.
- Distinct double-stranded DNA (dsDNA) sequences were differentiated by ionic current measurements during translocation.
- Poly(A-T)40 exhibited lower current blockage than poly(G-C)40 in BN nanopores, contrasting with graphene.
- dsDNA translocation through BN nanopores was unimpeded, suggesting stall-free movement.
Conclusions:
- Boron nitride (BN) nanopores are suitable for detecting specific DNA sequences.
- The unimpeded translocation of dsDNA in BN nanopores indicates potential for stall-free sequencing devices.
- BN nanopores possess advantageous properties over graphene, including hydrophilicity and non-metallic nature.
- BN nanopores are promising for developing next-generation high-speed, low-cost biological sensors.

