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Updated: Mar 30, 2026

Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Echinocandin Resistance in Candida
1Public Health Research Institute, New Jersey Medical School-Rutgers Biomedical and Health Sciences, Newark.
Abstract:
Invasive fungal infections are an important infection concern for patients with underlying immunosuppression. Antifungal therapy is a critical component of patient care, but therapeutic choices are limited due to few drug classes. Antifungal resistance, especially among Candida species, aggravates the problem. The echinocandin drugs (micafungin, anidulafungin, and caspofungin) are the preferred choice to treat a range of candidiasis. They target the fungal-specific enzyme glucan synthase, which is responsible for the biosynthesis of a major cell wall polymer. Therapeutic failure involves acquisition of resistance, although it is a rare event among most Candida species. However, in some settings, higher-level resistance has been reported among Candida glabrata, which is also frequently resistant to azole drugs, resulting in difficult-to-treat multidrug-resistant strains. The mechanism of echinocandin resistance involves amino acid changes in "hot spot" regions of FKS-encoded subunits of glucan synthase, which decreases the sensitivity of enzyme to drug, resulting in higher minimum inhibitory concentration values. The cellular processes promoting the formation of resistant FKS strains involve complex stress response pathways that yield a variety of adaptive compensatory genetic responses. Standardized broth microdilution techniques can be used to distinguish FKS mutant strains from wild type, but testing C. glabrata with caspofungin should be approached cautiously. Finally, clinical factors that promote echinocandin resistance include prophylaxis, host reservoirs including biofilms in the gastrointestinal tract, and intra-abdominal infections. An understanding of clinical and molecular factors that promote echinocandin resistance is critical to develop better diagnostic tools and therapeutic strategies to overcome resistance.
Insights
Echinocandin antifungal resistance, particularly in Candida glabrata, poses a significant challenge due to FKS mutations. Understanding resistance mechanisms is crucial for developing new antifungal therapies.
Area of Science:
- Mycology
- Infectious Diseases
- Pharmacology
Background:
- Invasive fungal infections are a major concern in immunocompromised patients.
- Limited antifungal drug classes and emerging resistance, especially in Candida species, complicate treatment.
- Echinocandins are key antifungals targeting fungal cell wall synthesis.
Purpose of the Study:
- To review the mechanisms and clinical factors contributing to echinocandin resistance.
- To highlight the challenges posed by multidrug-resistant Candida glabrata strains.
- To emphasize the need for improved diagnostics and therapeutics.
Main Methods:
- Review of literature on echinocandin resistance mechanisms.
- Discussion of molecular mechanisms involving FKS mutations in glucan synthase.
- Analysis of clinical factors promoting resistance development.
Main Results:
- Echinocandin resistance is primarily mediated by FKS mutations in glucan synthase.
- Candida glabrata exhibits higher-level resistance and is often multidrug-resistant.
- Complex cellular stress responses contribute to the emergence of resistant strains.
- Clinical factors like prophylaxis and biofilms promote resistance.
Conclusions:
- Understanding echinocandin resistance is vital for combating invasive fungal infections.
- Development of novel diagnostic tools and therapeutic strategies is essential.
- Addressing resistance in Candida glabrata is a priority for effective patient care.
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