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A Protocol for Analyzing Hepatitis C Virus Replication
Published on: June 26, 2014
Involvement of FKBP6 in hepatitis C virus replication
Hirotake Kasai1, Kunihiro Kawakami2, Hiromasa Yokoe3
1Department of Microbiology, Faculty of Medicine, University of Yamanashi, Chuo-shi, Yamanashi 409-3898, Japan.
Insights
Hepatitis C virus (HCV) uses the chaperone system for replication. Researchers found FKBP6, a cochaperone, is essential for HCV replication by interacting with the viral protein NS5A.
Area of Science:
- Virology
- Molecular Biology
- Cellular Biology
Background:
- Viruses hijack host cell machinery, including chaperone systems, for replication.
- The hepatitis C virus (HCV) relies on host factors for its lifecycle.
- Cochaperones play crucial roles in protein folding and viral processes.
Purpose of the Study:
- To identify host factors essential for hepatitis C virus (HCV) replication.
- To investigate the role of cochaperone FKBP6 in HCV replication.
- To elucidate the interaction between FKBP6 and HCV proteins.
Main Methods:
- Identified FKBP6 as an HCV replication factor.
- Analyzed the interaction between FKBP6 and HCV nonstructural protein 5A (NS5A).
- Utilized FKBP6-knockout hepatoma cell lines and FKBP8 inhibitors to assess viral replication.
- Examined the colocalization of FKBP6, NS5A, FKBP8, and double-stranded RNA in infected cells.
Main Results:
- FKBP6, a peptidyl prolyl cis-trans isomerase, interacts with HCV NS5A via its TPR domains and NS5A's Val(121).
- FKBP6 colocalizes with NS5A, FKBP8, and double-stranded RNA in HCV-infected cells.
- FKBP6 knockout cells showed complete suppression of HCV replication, which was restored by FKBP6 expression. FKBP8 inhibition also suppressed replication.
Conclusions:
- FKBP6 is an HCV-induced host factor crucial for viral replication.
- FKBP6 supports HCV replication by cooperating with NS5A and potentially FKBP8.
- Targeting FKBP6 or its interaction with NS5A could be a therapeutic strategy against HCV.
Abstract:
The chaperone system is known to be exploited by viruses for their replication. In the present study, we identified the cochaperone FKBP6 as a host factor required for hepatitis C virus (HCV) replication. FKBP6 is a peptidyl prolyl cis-trans isomerase with three domains of the tetratricopeptide repeat (TPR), but lacks FK-506 binding ability. FKBP6 interacted with HCV nonstructural protein 5A (NS5A) and also formed a complex with FKBP6 itself or FKBP8, which is known to be critical for HCV replication. The Val(121) of NS5A and TPR domains of FKBP6 were responsible for the interaction between NS5A and FKBP6. FKBP6 was colocalized with NS5A, FKBP8, and double-stranded RNA in HCV-infected cells. HCV replication was completely suppressed in FKBP6-knockout hepatoma cell lines, while the expression of FKBP6 restored HCV replication in FKBP6-knockout cells. A treatment with the FKBP8 inhibitor N-(N', N'-dimethylcarboxamidomethyl)cycloheximide impaired the formation of a homo- or hetero-complex consisting of FKBP6 and/or FKBP8, and suppressed HCV replication. HCV infection promoted the expression of FKBP6, but not that of FKBP8, in cultured cells and human liver tissue. These results indicate that FKBP6 is an HCV-induced host factor that supports viral replication in cooperation with NS5A.
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