Characterization of phthiocerol and phthiodiolone dimycocerosate esters of M. tuberculosis by multiple-stage linear ion-trap MS
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Updated: Mar 30, 2026

Analysis of the Lipid Composition of Mycobacteria by Thin Layer Chromatography
Published on: April 16, 2021
Kelly N Flentie1, Christina L Stallings1, John Turk2
1Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO.
Abstract:
Both phthiocerol/phthiodiolone dimycocerosate (PDIM) and phenolic glycolipids are abundant virulent lipids in the cell wall of various pathogenic mycobacteria, which can synthesize a wide range of complex high-molecular-mass lipids. In this article, we describe linear ion-trap MS(n) mass spectrometric approach for structural study of PDIMs, which were desorbed as the [M + Li](+) and [M + NH(4)](+) ions by ESI. We also applied charge-switch strategy to convert the mycocerosic acid substituents to their N-(4-aminomethylphenyl) pyridinium (AMPP) derivatives and analyzed them as M (+) ions, following alkaline hydrolysis of the PDIM to release mycocerosic acids. The structural information from MS(n) on the [M + Li](+) and [M + NH(4)](+) molecular species and on the M (+) ions of the mycocerosic acid-AMPP derivative affords realization of the complex structures of PDIMs in Mycobacterium tuberculosis biofilm, differentiation of phthiocerol and phthiodiolone lipid families and complete structure identification, including the phthiocerol and phthiodiolone backbones, and the mycocerosic acid substituents, including the locations of their multiple methyl side chains, can be achieved.
Insights
This study introduces a mass spectrometry method to analyze complex lipids called phthiocerol/phthiodiolone dimycocerosates (PDIMs) in Mycobacterium tuberculosis. The approach enables detailed structural identification of these virulent lipids within biofilms.
Area of Science:
- Lipidomics
- Mass Spectrometry
- Mycobacterial Cell Wall Biology
Background:
- Phthiocerol/phthiodiolone dimycocerosates (PDIMs) are crucial virulent lipids in pathogenic mycobacteria cell walls.
- These lipids contribute to the complex high-molecular-mass lipid profile of mycobacteria.
- Understanding PDIM structure is vital for studying mycobacterial pathogenesis.
Purpose of the Study:
- To develop and apply a linear ion-trap MS(n) mass spectrometric approach for detailed structural analysis of PDIMs.
- To elucidate the complex structures of PDIMs in Mycobacterium tuberculosis biofilms.
- To differentiate between phthiocerol and phthiodiolone lipid families and identify mycocerosic acid substituents.
Main Methods:
- Electrospray ionization (ESI) of PDIMs to form [M + Li](+) and [M + NH(4)](+) ions.
- Application of a charge-switch strategy converting mycocerosic acid substituents to N-(4-aminomethylphenyl) pyridinium (AMPP) derivatives after alkaline hydrolysis.
- Analysis of AMPP derivatives as M (+) ions using linear ion-trap MS(n) for structural elucidation.
Main Results:
- Successful desorption of PDIMs as [M + Li](+) and [M + NH(4)](+) ions.
- Characterization of mycocerosic acid substituents as AMPP derivatives.
- Comprehensive structural information obtained, including backbones and methyl side chain locations, enabling differentiation of lipid families.
Conclusions:
- The described MS(n) approach provides a powerful tool for the complete structural identification of complex PDIMs.
- This method facilitates the study of PDIMs in Mycobacterium tuberculosis biofilms.
- The strategy allows for detailed characterization of lipid backbones and diverse mycocerosic acid substituents.
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