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Reliable Viscosity Calculation from Equilibrium Molecular Dynamics Simulations: A Time Decomposition Method.
Yong Zhang1, Akihito Otani1, Edward J Maginn1
1Department of Chemical and Biomolecular Engineering and the Joint Center for Energy Storage Research, University of Notre Dame , Notre Dame, Indiana 46556, United States.
A new time decomposition approach improves shear viscosity calculations using Green-Kubo integrals. This method uses multiple trajectories and objective fitting to reduce variability and enhance accuracy for fluid simulations.
Area of Science:
- Computational physics
- Fluid dynamics
- Chemical engineering
Background:
- Equilibrium molecular dynamics with Green-Kubo integrals is standard for fluid shear viscosity.
- This method is computationally intensive and prone to variability due to difficulties in identifying integral plateau regions.
Purpose of the Study:
- To develop a more robust and automatable method for computing shear viscosity.
- To reduce uncertainty and improve objectivity in Green-Kubo viscosity calculations.
Main Methods:
- Proposed a time decomposition approach using multiple independent trajectories.
- Applied Green-Kubo relation to each trajectory and averaged running integrals.
- Fitted averaged integrals to a double-exponential function with a weighting function derived from standard deviation.
Main Results:
- The developed weighting function minimizes uncertainty in shear viscosity estimation.
- An objective method for determining integration cutoff time (tcut) was established.
- The approach was successfully applied to ethanol and [BMIM][Tf2N] ionic liquid, yielding reproducible and reliable viscosity values.
Conclusions:
- The time decomposition approach offers an objective, automatable, and robust method for shear viscosity computation.
- This technique is suitable for computational screening studies and reduces reliance on human intervention.
- The method provides reliable viscosity data for diverse liquids across temperatures.
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