NetMatchStar: an enhanced Cytoscape network querying app
Related Experiment Video
Updated: Mar 29, 2026

11:19
Label-Free Immunoprecipitation Mass Spectrometry Workflow for Large-scale Nuclear Interactome Profiling
Published on: November 17, 2019
17.3K
Fabio Rinnone1, Giovanni Micale1, Vincenzo Bonnici2
1Department of Math and Computer Science, University of Catania, Catania, 95125, Italy.
F1000Research
|December 2, 2015
Abstract:
We present NetMatchStar, a Cytoscape app to find all the occurrences of a query graph in a network and check for its significance as a motif with respect to seven different random models. The query can be uploaded or built from scratch using Cytoscape facilities. The app significantly enhances the previous NetMatch in style, performance and functionality. Notably NetMatchStar allows queries with wildcards.

