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Published on: August 13, 2020
Accurate Conformational Energy Differences of Carbohydrates: A Complete Basis Set Extrapolation
Gábor I Csonka1, Jakub Kaminsky2
1Department of Inorganic and Analytical Chemistry, Budapest University of Technology , Szent Gellért tér 4, Budapest, H-1521 Hungary.
Accurate computational methods are crucial for understanding saccharide structures. This study provides benchmark relative energies for saccharide conformations, evaluating density functional methods for improved accuracy in carbohydrate analysis.
Area of Science:
- Computational Chemistry
- Carbohydrate Chemistry
- Quantum Chemistry
Background:
- Accurate prediction of molecular conformations is essential in chemistry.
- Saccharides exhibit complex conformational landscapes.
- Computational methods are widely used to study saccharide structures.
Purpose of the Study:
- To compute benchmark quality relative conformational energies for gas-phase saccharide conformers.
- To re-evaluate the performance of density functional theory (DFT) methods for saccharide conformational analysis.
- To identify superior DFT functionals for predicting saccharide relative energies.
Main Methods:
- Correlated ab initio wave function calculations using nonrelativistic frozen core MP2 complete basis set extrapolation.
- Estimation of remaining correlation effects via frozen core coupled-cluster singles and doubles [CCSD(T)] calculations.
- Application to test sets of α- and β-d-allopyranose, 3,6-anhydro-4-O-methyl-d-galactitol, and β-d-glucopyranose conformers.
Main Results:
- Conformational energies for the tested saccharide sets varied by approximately 7 kcal/mol.
- B3PW91 and PBE0 density functional methods showed systematically better performance than B3LYP and M05-2X.
- Functionals incorporating exact constraints outperformed empirically fitted functionals for monosaccharide conformer relative energies.
Conclusions:
- The study provides high-quality reference data for saccharide conformational energies.
- DFT methods based on exact constraints are recommended for accurate conformational analysis of saccharides.
- This work aids in selecting appropriate computational tools for carbohydrate research.
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