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Phylogenetic analysis of fungal heterotrimeric G protein-encoding genes and their expression during dimorphism in
Marco Iván Valle-Maldonado1, Irvin Eduardo Jácome-Galarza2, Alma Laura Díaz-Pérez1
1Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, 58038, Morelia, Mich., Mexico.
Abstract:
In fungi, heterotrimeric G proteins are key regulators of biological processes such as mating, virulence, morphology, among others. Mucor circinelloides is a model organism for many biological processes, and its genome contains the largest known repertoire of genes that encode putative heterotrimeric G protein subunits in the fungal kingdom: twelve Gα (McGpa1-12), three Gβ (McGpb1-3), and three Gγ (McGpg1-3). Phylogenetic analysis of fungal Gα showed that they are divided into four distinct groups as reported previously. Fungal Gβ and Gγ are also divided into four phylogenetic groups, and to our understanding this is the first report of a phylogenetic classification for fungal Gβ and Gγ subunits. Almost all genes that encode putative heterotrimeric G subunits in M. circinelloides are differentially expressed during dimorphic growth, except for McGpg1 (Gγ) that showed very low mRNA levels at all developmental stages. Moreover, several of the subunits are expressed in a similar pattern and at the same level, suggesting that they constitute discrete complexes. For example, McGpb3 (Gβ), and McGpg2 (Gγ), are co-expressed during mycelium growth, and McGpa1, McGpb2, and McGpg2, are co-expressed during yeast development. These findings provide the conceptual framework to study the biological role of these genes during M. circinelloides morphogenesis.
Insights
Mucor circinelloides possesses the largest known fungal G protein gene repertoire. Differential expression of these genes during dimorphic growth suggests distinct roles in fungal development and morphogenesis.
Area of Science:
- Mycology
- Molecular Biology
- Genomics
Background:
- Heterotrimeric G proteins regulate crucial fungal processes like mating, virulence, and morphology.
- Mucor circinelloides is a valuable model organism for studying fungal biology.
- The M. circinelloides genome harbors an extensive collection of genes encoding G protein subunits.
Purpose of the Study:
- To characterize the repertoire of heterotrimeric G protein subunit genes in Mucor circinelloides.
- To perform phylogenetic analysis of fungal G protein subunits.
- To investigate the expression patterns of these genes during dimorphic growth.
Main Methods:
- Bioinformatic analysis and phylogenetic classification of Gα, Gβ, and Gγ subunits.
- Quantitative analysis of gene expression during different developmental stages (dimorphic growth).
- Identification of co-expressed gene clusters.
Main Results:
- M. circinelloides genome encodes twelve Gα, three Gβ, and three Gγ subunits, the largest known fungal repertoire.
- Phylogenetic analysis classified fungal Gα, Gβ, and Gγ subunits into four distinct groups.
- Most G protein subunit genes are differentially expressed during dimorphic growth, with specific subunits co-expressed during mycelial and yeast development.
Conclusions:
- The extensive G protein gene family in M. circinelloides provides a rich resource for studying fungal signaling.
- Differential and co-expression patterns suggest specialized roles for specific G protein complexes in morphogenesis.
- This study establishes a framework for future functional studies of G protein signaling in M. circinelloides development.
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