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Updated: Mar 29, 2026

Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
An emerging role for cytopathology in precision oncology
Chantal Pauli1,2, Loredana Puca1,2, Juan Miguel Mosquera1,2
1Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York.
Abstract:
Precision medicine is an emerging field in medicine for disease prevention and treatment that takes into account the individual variability in genes, environment, and lifestyle for each individual patient. The authors have developed a special program as part of the Englander Institute for Precision Medicine to grow patient-derived, 3-dimensional tumor organoids for tumor-specific drug testing, tailoring treatment strategies, and as models for studying drug resistance. Routine cytology preparations represent a cost-effective and powerful tool to aid in performing molecular testing in the age of personalized medicine. In this commentary, the platforms used for the characterization and validation of patient-derived, 3-dimensional tumor organoids are outlined and discussed, and the role of cytology as a cost-effective and powerful quality-control measure is illustrated.
Insights
Patient-derived tumor organoids enable personalized cancer treatment and drug resistance studies. Cytology offers a cost-effective quality control for molecular testing in precision medicine.
Area of Science:
- Oncology
- Genomics
- Biotechnology
Background:
- Precision medicine tailors disease prevention and treatment to individual variability in genes, environment, and lifestyle.
- The Englander Institute for Precision Medicine developed a program for patient-derived, 3D tumor organoids.
- These organoids are used for tumor-specific drug testing, treatment strategy tailoring, and drug resistance modeling.
Purpose of the Study:
- To outline and discuss platforms for characterizing and validating patient-derived, 3D tumor organoids.
- To illustrate the role of cytology as a cost-effective quality control measure in precision medicine.
Main Methods:
- Development of a program to grow patient-derived, 3D tumor organoids.
- Utilizing routine cytology preparations for molecular testing.
- Characterization and validation of tumor organoids using various platforms.
Main Results:
- Patient-derived 3D tumor organoids serve as valuable models for personalized drug testing and resistance studies.
- Cytology preparations are effective and economical for molecular testing.
- Established platforms facilitate the characterization and validation of these organoids.
Conclusions:
- Patient-derived 3D tumor organoids are crucial for advancing precision medicine.
- Cytology provides a vital, cost-effective quality control in the era of personalized molecular diagnostics.
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