Phosphorylation of RAF Kinase Dimers Drives Conformational Changes that Facilitate Transactivation

Pablo G Jambrina1, Nora Rauch2, Ruth Pilkington2

  • 1Department of Chemistry, King's College London, London, SE1 1DB, UK.

Insights

Phosphorylation of RAF kinases promotes dimerization by forming salt bridges, enhancing RAF inhibitor resistance. This study reveals a structure-based mechanism for RAF auto-transactivation, offering new strategies against drug resistance.

Area of Science:

  • Molecular biology
  • Biochemistry
  • Structural biology

Background:

  • RAF kinases are crucial in the MAPK pathway and are targets for cancer therapy.
  • RAF dimerization contributes to physiological activation and drug resistance.
  • Understanding RAF activation mechanisms is key for developing effective cancer treatments.

Purpose of the Study:

  • To elucidate the structural mechanism by which RAF dimerization occurs.
  • To investigate the role of phosphorylation in facilitating RAF dimerization.
  • To provide insights into overcoming drug resistance in RAF-targeted therapies.

Main Methods:

  • Utilized molecular dynamics simulations.
  • Analyzed interprotomer salt bridge formation.
  • Examined interactions between the R-spine, a conserved Trp residue, and the N-terminal acidic (NtA) motif.

Main Results:

  • Phosphorylation of the NtA motif facilitates RAF dimerization via interprotomer salt bridges.
  • The R-spine interacts with a conserved Trp residue near the NtA motif, linking active sites.
  • A structure-based mechanism for RAF auto-transactivation is proposed.

Conclusions:

  • This study provides the first structure-based mechanism for RAF auto-transactivation.
  • The findings illuminate how phosphorylation drives RAF dimerization and modulates activity.
  • The proposed mechanism may be applicable to other kinases, aiding in overcoming drug resistance.

Related Concept Videos

MAPK Signaling Cascades01:07

MAPK Signaling Cascades

Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
9.2K
Receptor Tyrosine Kinases01:26

Receptor Tyrosine Kinases

Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
20.7K
Amplifying Signals via Enzymatic Cascade01:22

Amplifying Signals via Enzymatic Cascade

When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze...
19.2K
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
7.9K
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a...
6.3K
Small GTPases - Ras and Rho01:24

Small GTPases - Ras and Rho

Ras and Rho are small monomeric GTPases that act downstream of receptor tyrosine kinase (RTK) and regulate various cellular processes. These GTPases switch between active and inactive states by binding to guanine nucleotides.
Three regulatory proteins control their activity:
5.7K