The Naming of Names: Guidelines for Gene Nomenclature in Marchantia

John L Bowman1, Takashi Araki2, Mario A Arteaga-Vazquez3

  • 1School of Biological Sciences, Monash University, Melbourne, Victoria 3800, Australia john.bowman@monash.edu tkohchi@lif.kyoto-u.ac.jp.

Plant & Cell Physiology
|December 9, 2015
PubMed

Insights

New guidelines for Marchia polymorpha gene and transgene nomenclature will improve consistency in research. This will reduce confusion and redundancy in scientific literature for this important model organism.

Area of Science:

  • Plant Biology
  • Genomics
  • Molecular Biology

Background:

  • Marchia polymorpha has been a model organism for biological research for nearly 200 years.
  • There is a resurgence in interest in Marchia polymorpha as a model genetic organism, particularly within the genomics era.

Purpose of the Study:

  • To establish community guidelines for Marchia polymorpha gene and transgene nomenclature.
  • To promote consistency and reduce redundancy and confusion in scientific literature.

Main Methods:

  • Community-based consensus building for nomenclature rules.
  • Review of existing nomenclature practices.

Main Results:

  • A set of proposed guidelines for Marchia polymorpha gene and transgene nomenclature has been developed.
  • These guidelines aim to standardize naming conventions.

Conclusions:

  • The proposed nomenclature guidelines are expected to enhance the utility of Marchia polymorpha in genetic research.
  • Adoption of these guidelines will foster clearer communication and collaboration within the scientific community.

Related Concept Videos

Asexual Reproduction02:38

Asexual Reproduction

Asexual reproduction allows plants to reproduce without growing flowers, attracting pollinators, or dispersing seeds. Offspring are genetically identical to the parent and produced without the fusion of male and female gametes.
38.2K
Animal Mitochondrial Genetics02:59

Animal Mitochondrial Genetics

Among all the organelles in an animal cell, only mitochondria have their own independent genomes. Animal mitochondrial DNA is a double-stranded, closed-circular molecule with around 20,000 base pairs. Mitochondrial DNA is unique in that one of its two strands, the heavy, or H, -strand is guanine rich, whereas the complementary strand is cytosine rich and called the light, or L, -strand. Compared to nuclear DNA, mitochondrial DNA has a very low percentage of non-coding regions and is marked by...
10.0K
Export of Mitochondrial and Chloroplast Genes02:19

Export of Mitochondrial and Chloroplast Genes

A eukaryotic cell can have up to three different types of genetic systems: nuclear, mitochondrial, and chloroplast. During evolution, organelles have exported many genes to the nucleus; this transfer is still ongoing in some plant species. Approximately 18% of the Arabidopsis thaliana nuclear genome is thought to be derived from the chloroplast’s cyanobacterial ancestor, and around 75% of the yeast genome derived from the mitochondria’s bacterial ancestor. This export has occurred...
4.4K
Genetic Lingo01:11

Genetic Lingo

Overview
117.6K
Transgenic Plants02:50

Transgenic Plants

Recombinant DNA technology called transgenesis is often used to add a foreign gene or remove a detrimental gene from an organism. Such genetically modified organisms are called transgenic organisms.
The first-ever transgenic plant was a tobacco plant developed in 1983 that showed resistance against the tobacco mosaic virus. Since then, many transgenic plants have been developed and commercialized for improving the agricultural, ornamental, and horticultural value of a crop plant. Transgenic...
9.1K
Organization of Genes02:07

Organization of Genes

Overview
74.3K