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Updated: Mar 28, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Molecular characterization of novel splice site mutation causing protein C deficiency
Mohamed H Al-Hamed1, Fatma AlBatniji, Ghadah A AlDakheel
1aSaudi Diagnostics Laboratory (SDL), Genetics Department, King Faisal Specialist Hospital and Research Centre bPediatric Hematology Division, Pediatrics Department, Prince Sultan Military Medical City, Riyadh, Saudi Arabia.
Abstract:
Congenital protein C deficiency is an inherited coagulation disorder associated with an elevated risk of venous thromboembolism. A Saudi Arabian male from a consanguineous family was admitted to neonatal intensive care unit in his first days of life because of transient tachypnea and hematuria. Laboratory investigations determined low platelet and protein C deficiency. Direct sequencing of PROC gene and RNA analysis were performed. Analysis of factor V Leiden (G1691A) and factor II (G20210A) mutations was also done. Novel homozygous splice site mutation c.796+3A>T was detected in the index case and segregation was confirmed in the family. RNA analysis revealed the pathogenicity of the mutation by skipping exon 8 of PROC gene and changing the donor splice site of the exon. Detection of the molecular cause of protein C deficiency reduces life threatening and facilitates inductive carrier testing, prenatal and preimplantation genetic diagnosis for families.
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