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Integration of Bioinformatics Approaches and Experimental Validations to Understand the Role of Notch Signaling in Ovarian Cancer
Published on: January 12, 2020
Genes implicated in stem cell identity and temporal programme are directly targeted by Notch in neuroblast tumours
Evanthia Zacharioudaki1, Benjamin E Housden2, George Garinis3
1Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3DY, UK Institute of Molecular Biology and Biotechnology, FORTH-Hellas, Heraklion, Crete 70013, Greece Department of Biology, University of Crete, Heraklion, Greece GR71409.
Abstract:
Notch signalling is involved in a multitude of developmental decisions and its aberrant activation is linked to many diseases, including cancers. One example is the neural stem cell tumours that arise from constitutive Notch activity in Drosophila neuroblasts. To investigate how hyperactivation of Notch in larval neuroblasts leads to tumours, we combined results from profiling the upregulated mRNAs and mapping the regions bound by the core Notch pathway transcription factor Su(H). This identified 246 putative direct Notch targets. These genes were highly enriched for transcription factors and overlapped significantly with a previously identified regulatory programme dependent on the proneural transcription factor Asense. Included were genes associated with the neuroblast maintenance and self-renewal programme that we validated as Notch regulated in vivo. Another group were the so-called temporal transcription factors, which have been implicated in neuroblast maturation. Normally expressed in specific time windows, several temporal transcription factors were ectopically expressed in the stem cell tumours, suggesting that Notch had reprogrammed their normal temporal regulation. Indeed, the Notch-induced hyperplasia was reduced by mutations affecting two of the temporal factors, which, conversely, were sufficient to induce mild hyperplasia on their own. Altogether, the results suggest that Notch induces neuroblast tumours by directly promoting the expression of genes that contribute to stem cell identity and by reprogramming the expression of factors that could regulate maturity.
Insights
Notch signalling overactivation in Drosophila neuroblasts drives tumor formation by promoting stem cell identity genes and reprogramming temporal factors. This research clarifies Notch
Area of Science:
- Developmental Biology
- Cancer Biology
- Genetics
Background:
- Notch signalling regulates crucial developmental processes.
- Aberrant Notch activation is implicated in diseases, including cancers like neural stem cell tumors.
- Constitutive Notch activity in Drosophila neuroblasts causes tumor development.
Purpose of the Study:
- To investigate the mechanisms by which Notch hyperactivation leads to neuroblast tumors in Drosophila.
- To identify direct Notch target genes and understand their role in tumor formation.
Main Methods:
- Profiling upregulated mRNAs in neuroblast tumors.
- Mapping DNA-binding regions of the Notch pathway transcription factor Su(H).
- In vivo validation of Notch-regulated genes.
Main Results:
- Identified 246 direct Notch target genes, enriched for transcription factors.
- Discovered overlap with the proneural transcription factor Asense regulatory program.
- Validated Notch regulation of neuroblast maintenance and self-renewal genes.
- Observed ectopic expression of temporal transcription factors in tumors, indicating Notch-induced reprogramming.
- Demonstrated that mutations in temporal factors reduce Notch-induced hyperplasia, while these factors can induce hyperplasia independently.
Conclusions:
- Notch signaling induces neuroblast tumors by upregulating stem cell identity genes.
- Notch signaling reprograms the expression of temporal transcription factors, affecting neuroblast maturation.
- These combined effects contribute to the development of neural stem cell tumors.
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