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Published on: September 13, 2022
Aptamers Binding to c-Met Inhibiting Tumor Cell Migration
Birgit Piater1, Achim Doerner1, Ralf Guenther1
1Protein Engineering and Antibody Technologies, Merck KGaA, Darmstadt, Germany.
Abstract:
The human receptor tyrosine kinase c-Met plays an important role in the control of critical cellular processes. Since c-Met is frequently over expressed or deregulated in human malignancies, blocking its activation is of special interest for therapy. In normal conditions, the c-Met receptor is activated by its bivalent ligand hepatocyte growth factor (HGF). Also bivalent antibodies can activate the receptor by cross linking, limiting therapeutic applications. We report the generation of the RNA aptamer CLN64 containing 2'-fluoro pyrimidine modifications by systematic evolution of ligands by exponential enrichment (SELEX). CLN64 and a previously described single-stranded DNA (ssDNA) aptamer CLN3 exhibited high specificities and affinities to recombinant and cellular expressed c-Met. Both aptamers effectively inhibited HGF-dependent c-Met activation, signaling and cell migration. We showed that these aptamers did not induce c-Met activation, revealing an advantage over bivalent therapeutic molecules. Both aptamers were shown to bind overlapping epitopes but only CLN3 competed with HGF binding to cMet. In addition to their therapeutic and diagnostic potential, CLN3 and CLN64 aptamers exhibit valuable tools to further understand the structural and functional basis for c-Met activation or inhibition by synthetic ligands and their interplay with HGF binding.
Insights
New RNA and DNA aptamers, CLN64 and CLN3, effectively inhibit c-Met receptor activation and signaling without inducing receptor activation, offering therapeutic potential for cancer treatment.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- The human receptor tyrosine kinase c-Met is crucial for cellular processes.
- Dysregulation of c-Met is implicated in various human malignancies, making it a therapeutic target.
- Hepatocyte growth factor (HGF) activates c-Met; bivalent antibodies can also activate it, limiting their therapeutic use.
Purpose of the Study:
- To generate and characterize novel aptamers for c-Met inhibition.
- To evaluate the therapeutic potential of these aptamers in blocking c-Met activation and signaling.
- To compare aptamer-based inhibition with existing therapeutic strategies.
Main Methods:
- Systematic evolution of ligands by exponential enrichment (SELEX) was used to generate the RNA aptamer CLN64.
- Characterization of aptamer binding affinity and specificity to c-Met.
- Assessment of aptamer-induced inhibition of HGF-dependent c-Met activation, signaling, and cell migration.
Main Results:
- The RNA aptamer CLN64 and a DNA aptamer CLN3 demonstrated high specificity and affinity for c-Met.
- Both CLN64 and CLN3 effectively inhibited HGF-induced c-Met activation, downstream signaling, and cell migration.
- Unlike bivalent antibodies, these aptamers did not induce c-Met activation.
- CLN3 competed with HGF binding, while both aptamers bound overlapping epitopes.
Conclusions:
- CLN64 and CLN3 are potent inhibitors of c-Met signaling with therapeutic and diagnostic potential.
- These aptamers offer an advantage over bivalent molecules by not inducing receptor activation.
- The aptamers serve as valuable tools for studying c-Met activation and inhibition mechanisms.
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