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How To Design a Successful p53-MDM2/X Interaction Inhibitor: A Thorough Overview Based on Crystal Structures
Natalia Estrada-Ortiz1, Constantinos G Neochoritis1, Alexander Dömling2
1Department of Drug Design, University of Groningen, Antonius Deusinglaan 1, 9700 AD, Groningen, The Netherlands.
Abstract:
A recent therapeutic strategy in oncology is based on blocking the protein-protein interaction between the murine double minute (MDM) homologues MDM2/X and the tumor-suppressor protein p53. Inhibiting the binding between wild-type (WT) p53 and its negative regulators MDM2 and/or MDMX has become an important target in oncology to restore the antitumor activity of p53, the so-called guardian of our genome. Interestingly, based on the multiple disclosed compound classes and structural analysis of small-molecule-MDM2 adducts, the p53-MDM2 complex is perhaps the best studied and most targeted protein-protein interaction. Several classes of small molecules have been identified as potent, selective, and efficient inhibitors of the p53-MDM2/X interaction, and many co-crystal structures with the protein are available. Herein we review the properties as well as preclinical and clinical studies of these small molecules and peptides, categorized by scaffold type. A particular emphasis is made on crystallographic structures and the observed binding modes of these compounds, including conserved water molecules present.
Insights
Targeting the interaction between MDM2/X and p53 is a key cancer therapy. Small molecules and peptides inhibiting this interaction show promise, with many structural studies available.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- The protein-protein interaction between murine double minute (MDM) homologues MDM2/X and the tumor-suppressor protein p53 is a critical regulator of cancer development.
- Restoring the function of wild-type (WT) p53, known as the guardian of the genome, by inhibiting its negative regulators MDM2 and/or MDMX is a significant therapeutic strategy in oncology.
Purpose of the Study:
- To review small molecules and peptides that inhibit the p53-MDM2/X interaction.
- To categorize these inhibitors by scaffold type and discuss their properties.
- To highlight preclinical and clinical studies, with a focus on crystallographic structures and binding modes.
Main Methods:
- Review of published literature on small-molecule and peptide inhibitors of the p53-MDM2/X interaction.
- Categorization of inhibitors based on scaffold type.
- Analysis of available co-crystal structures and binding modes.
Main Results:
- Several classes of small molecules and peptides have been identified as potent, selective, and efficient inhibitors of the p53-MDM2/X interaction.
- Numerous co-crystal structures of these inhibitors with the protein targets are available, providing insights into binding modes.
- Preclinical and clinical data for these compounds are being actively investigated.
Conclusions:
- Inhibiting the p53-MDM2/X interaction is a validated therapeutic approach in oncology.
- Structural biology plays a crucial role in understanding and designing effective inhibitors.
- Ongoing research continues to advance the development of these targeted therapies.
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