Related Experiment Video
Updated: Mar 28, 2026

11:55
Membrane Transport Processes Analyzed by a Highly Parallel Nanopore Chip System at Single Protein Resolution
Published on: August 16, 2016
12.3K
A rapid and affordable screening platform for membrane protein trafficking
Joshua C Snyder1, Thomas F Pack2, Lauren K Rochelle1
1Departments of Cell Biology, Duke University Medical Center, Durham, NC, 27710, USA.
BMC Biology
|December 19, 2015
Summary
A new low-cost membrane protein trafficking screen (IRFAP-HTS) enables rapid, quantitative analysis using standard equipment. This platform accelerates drug discovery by screening thousands of compounds, identifying glucocorticoids that modulate Lgr5 receptor trafficking.
Area of Science:
- Membrane protein research
- Drug discovery and development
- Biochemical screening technologies
Background:
- Membrane proteins are crucial drug targets, but screening is resource-intensive.
- Limited chemical space exploration and screening resources hinder drug discovery.
- A universally applicable and cost-effective screen for membrane protein trafficking was developed.
Purpose of the Study:
- To develop a high-throughput screening (HTS) platform for membrane protein trafficking.
- To enable low-cost, rapid, and quantitative assessment of membrane protein cell surface expression.
- To facilitate drug discovery and repurposing for membrane protein targets, particularly Lgr5.
Main Methods:
- Utilized the MarsCy1-fluorogen activating protein and near-infrared fluorogen SCi1 for detection.
- Developed the IRFAP-HTS assay for cell surface expression visualization on a standard infrared western-blotting scanner.
- Screened 11,258 FDA-approved and drug-like small molecules for modulators of Lgr5 internalization.
Main Results:
- Validated IRFAP-HTS by confirming trafficking of vasopressin-2 and dopamine receptor-2.
- Identified glucocorticoids as potent modulators that increase Lgr5 expression at the plasma membrane.
- Achieved screening of 5,000 compounds per hour with robust and quantitative results.
Conclusions:
- IRFAP-HTS offers a versatile, user-friendly, and cost-effective solution for membrane protein screening.
- The platform democratizes access to advanced screening for smaller laboratories by utilizing standard equipment.
- IRFAP-HTS accelerates drug discovery and repurposing, exemplified by the identification of Lgr5 modulators.
More Related Videos
Related Concept Videos
Protein Diffusion in the Membrane
6.2K
Proteins show rotational as well as lateral diffusion across the membrane. The lateral diffusion of proteins was confirmed through the cell fusion experiment where mouse and human cells were fused, resulting in hybrid cells. When the human and mouse cells fused, the specific membrane proteins on human and mouse cells were marked with the red and green-fluorescent markers, respectively. Initially, the red and green fluorescence was located on the respective hemisphere of the cell. As time...
6.2K
Cotranslational Protein Translocation
11.0K
Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
11.0K

