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Updated: Mar 28, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR RS-PCR
Published on: November 4, 2016
Draft Genome Sequences of a Unique t324-ST541-V Methicillin-Resistant Staphylococcus aureus Strain from a Pig
Dong Chan Moon1, Byung-Yong Kim2, Hyang-Mi Nam1
1Bacterial Disease Division, Animal and Plant Quarantine Agency, Anyang 14089, Republic of Korea.
Abstract:
Methicillin-resistant Staphylococcus aureus (MRSA), the major causative agent of nosocomial infection, has also been reported from non-human sources. A sequence type (ST) 541 MRSA isolate designated K12PJN53 was isolated from a healthy pig in 2012. The genome of K12PJN53 consists of 44 contiguous sequences (contigs), totalling 2,880,108 bases with 32.88% GC content. Among the annotated contigs, 14, 17, and 18 contained genes related to antimicrobial resistance, adherence, and toxin genes, respectively. The genomic distance of strain K12PJN53 was close to the ST398 strains. This is the first report of the draft genome sequence of a novel livestock-associated MRSA ST541 strain.
Insights
This study reports the first draft genome sequence of a novel livestock-associated Methicillin-resistant Staphylococcus aureus (MRSA) ST541 strain, K12PJN53, isolated from a pig. The findings reveal important genes for antimicrobial resistance, adherence, and toxins.
Area of Science:
- Microbiology
- Genomics
- Veterinary Medicine
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) is a significant cause of hospital-acquired infections.
- MRSA strains have been increasingly identified in non-human sources, including livestock.
- Livestock-associated MRSA (LA-MRSA) poses a growing public health concern due to potential transmission.
Purpose of the Study:
- To perform whole-genome sequencing of a novel MRSA ST541 strain (K12PJN53) isolated from a healthy pig.
- To analyze the genomic features of this livestock-associated MRSA strain.
- To understand the genetic relatedness of ST541 MRSA to other known MRSA strains.
Main Methods:
- Isolation of MRSA strain K12PJN53 from a healthy pig.
- Whole-genome sequencing and assembly of the K12PJN53 isolate.
- Bioinformatic analysis of the assembled genome to identify genes related to antimicrobial resistance, adherence, and toxins.
Main Results:
- The draft genome sequence of K12PJN53 comprises 44 contigs, totaling 2,880,108 bases.
- Annotated contigs revealed the presence of genes associated with antimicrobial resistance (14 contigs), adherence (17 contigs), and toxin production (18 contigs).
- Genomic analysis indicated that strain K12PJN53 is phylogenetically close to ST398 MRSA strains.
Conclusions:
- This study presents the first draft genome sequence of a novel livestock-associated MRSA ST541 strain.
- The genomic data provides insights into the genetic makeup of LA-MRSA ST541, including resistance and virulence factors.
- The findings highlight the importance of monitoring MRSA in livestock populations and understanding its genomic diversity.
Related Concept Videos
Clinical Significance of Antibiotic Resistance
Mechanism of Antibiotic Resistance in MRSA

