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Updated: Mar 28, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Allele-specific silencing of mutant p53 attenuates dominant-negative and gain-of-function activities
Swathi V Iyer1, Alejandro Parrales1, Priya Begani1
1Department of Cancer Biology, The University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS, USA.
Abstract:
Many p53 hotspot mutants not only lose the transcriptional activity, but also show dominant-negative (DN) and oncogenic gain-of-function (GOF) activities. Increasing evidence indicates that knockdown of mutant p53 (mutp53) in cancer cells reduces their aggressive properties, suggesting that survival and proliferation of cancer cells are, at least partially, dependent on the presence of mutp53. However, these p53 siRNAs can downregulate both wild-type p53 (wtp53) and mutp53, which limits their therapeutic applications. In order to specifically deplete mutp53, we have developed allele-specific siRNAs against p53 hotspot mutants and validated their biological effects in the absence or presence of wtp53. First, the mutp53-specific siRNAs selectively reduced protein levels of matched p53 mutants with minimal reduction in wtp53 levels. Second, downregulation of mutp53 in cancer cells expressing a mutp53 alone (p53mut) resulted in significantly decreased cell proliferation and migration. Third, transfection of mutp53-specific siRNAs in cancer cells expressing both wtp53 and mutp53 also reduced cell proliferation and migration with increased transcripts of p53 downstream target genes, which became further profound when cells were treated with an MDM2 inhibitor Nutlin-3a or a chemotherapeutic agent doxorubicin. These results indicate that depletion of mutp53 by its specific siRNA restored endogenous wtp53 activity in cells expressing both wtp53 and mutp53. This is the first study demonstrating biological effects and therapeutic potential of allele-specific silencing of mutp53 by mutp53-specific siRNAs in cancer cells expressing both wtp53 and mutp53, thus providing a novel strategy towards targeted cancer therapies.
Insights
Targeted therapies can now specifically silence mutant p53 (mutp53) using allele-specific siRNAs, reducing cancer cell proliferation and restoring wild-type p53 (wtp53) activity. This approach offers a novel strategy for cancer treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Many p53 hotspot mutants exhibit dominant-negative and oncogenic gain-of-function activities.
- Mutant p53 (mutp53) presence is crucial for cancer cell survival and proliferation.
- Existing p53 siRNAs lack specificity, affecting both wild-type p53 (wtp53) and mutp53.
Purpose of the Study:
- To develop and validate allele-specific siRNAs for targeted depletion of mutp53.
- To assess the biological effects of mutp53-specific siRNAs in cancer cells.
- To explore the therapeutic potential of mutp53 silencing.
Main Methods:
- Development of allele-specific siRNAs targeting p53 hotspot mutants.
- Validation of siRNA specificity in reducing mutp53 protein levels with minimal impact on wtp53.
- Assessment of cell proliferation and migration in cancer cells with and without wtp53 after siRNA transfection.
- Evaluation of downstream target gene expression and response to MDM2 inhibitors or chemotherapeutic agents.
Main Results:
- mutp53-specific siRNAs selectively reduced mutp53 protein levels, preserving wtp53.
- Downregulation of mutp53 significantly decreased cancer cell proliferation and migration.
- In cells with both wtp53 and mutp53, mutp53 silencing restored wtp53 activity, enhancing responses to treatments.
Conclusions:
- Allele-specific siRNAs offer a targeted approach to deplete mutp53.
- This strategy effectively reduces cancer cell aggressiveness and restores endogenous wtp53 function.
- mutp53-specific siRNAs represent a promising novel therapeutic strategy for cancers harboring p53 mutations.
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