Long noncoding RNA-HOTAIR affects chemoresistance by regulating HOXA1 methylation in small cell lung cancer cells

Shun Fang1, Hongyi Gao1,2, Yue Tong1

  • 1Department of Pathology, Zhujiang Hospital, Southern Medical University, Guangzhou, China.

Insights

Homeobox transcript antisense RNA (HOTAIR) promotes chemoresistance in small cell lung cancer (SCLC) by increasing HOXA1 methylation. Reducing HOTAIR enhances drug sensitivity and may offer new therapeutic strategies for SCLC.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genetics

Background:

  • Homeobox (HOX) transcript antisense RNA (HOTAIR), a long intergenic noncoding RNA (lincRNA), is implicated in various cancers.
  • Its role in small cell lung cancer (SCLC) chemoresistance remains largely unexplored.

Purpose of the Study:

  • To investigate the function of HOTAIR in SCLC chemoresistance.
  • To elucidate the underlying molecular mechanisms of HOTAIR-mediated chemoresistance.

Main Methods:

  • HOTAIR knockdown in multidrug-resistant and parental SCLC cell lines.
  • Assessment of drug sensitivity, apoptosis, and cell cycle progression.
  • Analysis of HOXA1 methylation using bisulfite sequencing PCR.
  • Evaluation of DNA methyltransferase (DNMT) expression.
  • RNA immunoprecipitation to validate HOTAIR-HOXA1 interaction.
  • In vivo tumor growth suppression studies.

Main Results:

  • Downregulation of HOTAIR sensitized SCLC cells to anticancer drugs, enhanced apoptosis, and induced cell cycle arrest.
  • HOTAIR depletion suppressed tumor growth in vivo.
  • Resistant SCLC cells exhibited increased HOXA1 methylation.
  • HOTAIR knockdown reduced HOXA1 methylation by decreasing DNMT1 and DNMT3b expression.
  • Direct interaction between HOTAIR and HOXA1 was confirmed.

Conclusions:

  • HOTAIR plays a significant role in mediating chemoresistance in SCLC.
  • The mechanism involves HOTAIR regulating HOXA1 methylation via DNMT1 and DNMT3b.
  • HOTAIR represents a potential therapeutic target for overcoming chemoresistance in SCLC adjuvant therapies.

Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
10.1K
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

3.8K
Types of RNA01:20

Types of RNA

Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...
16.2K
Types of RNA01:23

Types of RNA

Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
73.8K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
4.3K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
24.6K