Related Experiment Video
Updated: Mar 28, 2026

A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
Published on: April 1, 2019
Association of ATP-binding cassette transporter A1 gene polymorphisms with plasma lipid variability and coronary
Yuping Lu1, Yawen Liu1, Yong Li1
1Department of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Insights
This study found that variations in the ABCA1 gene are linked to changes in blood lipid levels and coronary heart disease (CHD) risk in the Chinese Han population. These ABCA1 gene variations may also influence how lipids affect CHD risk.
Area of Science:
- Genetics
- Cardiovascular Disease Epidemiology
- Biochemistry
Background:
- Apolipoprotein A1 (ApoA1) and ATP-binding cassette transporter A1 (ABCA1) are key regulators of cholesterol homeostasis.
- ABCA1 gene polymorphisms have been implicated in lipid metabolism and cardiovascular disease risk.
- Understanding the role of ABCA1 in coronary heart disease (CHD) is crucial for developing targeted prevention strategies.
Purpose of the Study:
- To investigate the association between ABCA1 gene polymorphisms and plasma lipid levels in the Chinese Han population.
- To determine the relationship between ABCA1 polymorphisms and the risk of developing coronary heart disease (CHD).
- To explore potential interactions between ABCA1 polymorphisms, lipid profiles, and CHD risk.
Main Methods:
- A case-control study involving 754 CHD patients and 760 controls from the Chinese Han population.
- Genotyping of four single nucleotide polymorphisms (SNPs) in the ABCA1 gene: rs363717, rs4149339, rs4149338 (in 3'UTR), and rs2230808 (in exon 35).
- Statistical analysis using SNPstats and SPSS software to assess associations and interactions.
Main Results:
- SNP rs363717 showed significant associations with CHD risk under codominant and dominant models.
- The nonsynonymous SNP rs2230808 was associated with elevated total cholesterol levels.
- A GCC haplotype (rs363717, rs4149339, rs4149338) was linked to a reduced risk of CHD.
- Interactions between ABCA1 SNPs and high triglyceride levels were found to increase CHD risk.
Conclusions:
- ABCA1 gene polymorphisms play a significant role in modulating plasma lipid variability.
- These polymorphisms are associated with altered coronary heart disease (CHD) risk in the studied population.
- ABCA1 variations may modify the impact of plasma lipids on the development of CHD.
Objective:
Our study aimed to investigate the association of ABCA1 polymorphisms with plasma lipid variability and CHD risk in the Chinese Han population.
Methods:
754 CHD patients and 760 controls were included in this case-control study. Three SNPs (rs363717, rs4149339, and rs4149338) in ABCA1 3'UTR and one nonsynonymous SNP (rs2230808) in ABCA1 exon 35 were selected and genotyped. The analysis of genetic data was performed using the SNPstats program and the SPSS17.0 software.
Results:
Significant associations were observed between SNP rs363717 and CHD risk under different genetic models before or after Bonferroni corrections (codominant model: OR = 0.70, P = 0.003 for AG vs. AA; dominant model: OR = 0.71, P = 0.003 for GG + AG vs. AA). The nonsynonymous SNP rs2230808 was associated with higher total cholesterol levels (P = 0.047). The GCC haplotype (consisting of alleles of SNPs rs363717, rs4149339, and rs4149338) was associated with a decreased risk of CHD (OR = 0.8, P = 0.027). Three ABCA1 SNPs interacted with high triglyceride levels to increase CHD risk (P values of interactions were 0.010 for rs363717, 0.010 for rs4149339, and 0.020 for rs4149338, respectively).
Conclusions:
Our results suggest that ABCA1 polymorphisms influence plasma lipid variability and CHD risk. ABCA1 polymorphisms could also modify the effects of plasma lipids on CHD risk.
Related Concept Videos
Pharmacogenetics of Drug Transporters: P-Glycoprotein and Solute Carrier Transporters
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Pharmacogenetics of Drug Targets: β₂-Adrenergic Receptors, Apo E, Thymidylate Synthase
Pharmacogenomics: Identification of New Drug Targets
Pharmacogenetics of Drug Metabolism: Overview
Principles of Pharmacogenetics: Types of Genetic Variants

