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Updated: Mar 27, 2026

Monitoring Activation of the Antiviral Pattern Recognition Receptors RIG-I And PKR By Limited Protease Digestion and Native PAGE
Published on: July 29, 2014
HDAC6 regulates cellular viral RNA sensing by deacetylation of RIG-I
Su Jin Choi1, Hyun-Cheol Lee2, Jae-Hoon Kim2
1Graduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon, Korea.
Abstract:
RIG-I is a key cytosolic sensor that detects RNA viruses through its C-terminal region and activates the production of antiviral interferons (IFNs) and proinflammatory cytokines. While posttranslational modification has been demonstrated to regulate RIG-I signaling activity, its significance for the sensing of viral RNAs remains unclear. Here, we first show that the RIG-I C-terminal region undergoes deacetylation to regulate its viral RNA-sensing activity and that the HDAC6-mediated deacetylation of RIG-I is critical for viral RNA detection. HDAC6 transiently bound to RIG-I and removed the lysine 909 acetylation in the presence of viral RNAs, promoting RIG-I sensing of viral RNAs. Depletion of HDAC6 expression led to impaired antiviral responses against RNA viruses, but not against DNA viruses. Consequently, HDAC6 knockout mice were highly susceptible to RNA virus infections compared to wild-type mice. These findings underscore the critical role of HDAC6 in the modulation of the RIG-I-mediated antiviral sensing pathway.
Insights
Histone deacetylase 6 (HDAC6) deacetylation of RIG-I is crucial for detecting viral RNA and initiating antiviral responses. HDAC6 deficiency impairs RNA virus detection and increases susceptibility to infection.
Area of Science:
- Immunology
- Virology
- Molecular Biology
Background:
- RIG-I (Retinoic acid-inducible protein I) is a crucial cytosolic sensor for viral RNA detection, initiating innate immune responses.
- Posttranslational modifications regulate RIG-I signaling, but their role in viral RNA sensing is not fully understood.
- Understanding RIG-I regulation is key to developing effective antiviral therapies.
Purpose of the Study:
- To investigate the role of deacetylation in regulating RIG-I's viral RNA-sensing activity.
- To identify the specific deacetylase involved and its mechanism of action.
- To assess the in vivo significance of this regulatory pathway in antiviral immunity.
Main Methods:
- Biochemical assays to study RIG-I deacetylation and binding with HDAC6.
- Analysis of RIG-I acetylation status (Lysine 909) in the presence of viral RNA.
- Gene depletion (siRNA) and knockout mouse models to assess antiviral responses.
- Infection studies with RNA and DNA viruses in wild-type and HDAC6 knockout mice.
Main Results:
- HDAC6-mediated deacetylation of RIG-I is critical for its viral RNA-sensing function.
- HDAC6 transiently binds to RIG-I and removes acetylation at Lysine 909 upon viral RNA detection.
- Depletion of HDAC6 impairs antiviral responses against RNA viruses but not DNA viruses.
- HDAC6 knockout mice exhibit increased susceptibility to RNA virus infections.
Conclusions:
- HDAC6 plays a vital role in modulating the RIG-I-mediated antiviral sensing pathway.
- HDAC6-dependent deacetylation enhances RIG-I's ability to detect viral RNA.
- This pathway is essential for effective host defense against RNA viruses.
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