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Updated: Mar 26, 2026

Measuring Single-Cell Mitochondrial DNA Copy Number and Heteroplasmy Using Digital Droplet Polymerase Chain Reaction
Published on: July 12, 2022
Association between Mitochondrial DNA Copy Number in Peripheral Blood and Incident CKD in the Atherosclerosis Risk in
Adrienne Tin1, Morgan E Grams2, Foram N Ashar3
1Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; atin1@jhu.edu.
Insights
Higher mitochondrial DNA (mtDNA) copy number in blood is linked to a reduced risk of developing chronic kidney disease (CKD). This association holds true even when considering common risk factors and inflammation markers.
Area of Science:
- Nephrology
- Mitochondrial Biology
- Epidemiology
Background:
- Mitochondrial dysfunction is a key factor in chronic kidney disease (CKD) development.
- Mitochondrial DNA (mtDNA) copy number serves as a biomarker for mitochondrial health.
- Elevated mtDNA copy number in blood correlates with reduced risks of diabetes and microalbuminuria, known CKD risk factors.
Purpose of the Study:
- To investigate the association between peripheral blood mitochondrial DNA (mtDNA) copy number and the incidence of CKD.
- To determine if mtDNA copy number predicts CKD development in a population-based cohort.
Main Methods:
- A population-based cohort of 9058 middle-aged adults was analyzed.
- Mitochondrial DNA (mtDNA) copy number was quantified using 25 mitochondrial single nucleotide polymorphisms.
- Participants were followed for a median of 19.6 years for CKD incidence.
Main Results:
- Higher mtDNA copy number was associated with lower prevalence of diabetes and reduced inflammation markers (C-reactive protein, white blood cell count).
- Increased mtDNA copy number significantly correlated with a lower risk of incident CKD (HR 0.65, P<0.001).
- This association remained significant after adjusting for traditional CKD risk factors and inflammation (HR 0.75, P<0.001).
Conclusions:
- Higher peripheral blood mtDNA copy number is an independent protective factor against CKD incidence.
- Mitochondrial DNA copy number may represent a novel biomarker for CKD risk stratification.
- Further research into modifiable factors affecting mtDNA copy number could inform CKD prevention strategies.
Abstract:
Mitochondrial dysfunction in kidney cells has been implicated in the pathogenesis of CKD. Mitochondrial DNA (mtDNA) copy number is a surrogate measure of mitochondrial function, and higher mtDNA copy number in peripheral blood has been associated with lower risk of two important risk factors for CKD progression, diabetes and microalbuminuria. We evaluated whether mtDNA copy number in peripheral blood associates with incident CKD in a population-based cohort of middle-aged adults. We estimated mtDNA copy number using 25 high-quality mitochondrial single nucleotide polymorphisms from the Affymetrix 6.0 array. Among 9058 participants, those with higher mtDNA copy number had a lower rate of prevalent diabetes and lower C-reactive protein levels and white blood cell counts. Baseline eGFR did not differ significantly by mtDNA copy number. Over a median follow-up of 19.6 years, 1490 participants developed CKD. Higher mtDNA copy number associated with lower risk of incident CKD (highest versus lowest quartile: hazard ratio 0.65; 95% confidence interval, 0.56 to 0.75; P<0.001) after adjusting for age, sex, and race. After adjusting for additional risk factors of CKD, including prevalent diabetes, hypertension, C-reactive protein level, and white blood cell count, this association remained significant (highest versus lowest quartile: hazard ratio 0.75; 95% confidence interval, 0.64 to 0.87; P<0.001). In conclusion, higher mtDNA copy number associated with lower incidence of CKD independent of traditional risk factors and inflammation biomarker levels in this cohort. Further research on modifiable factors influencing mtDNA copy number may lead to improvement in the prevention and treatment of CKD.
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