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Published on: April 25, 2018
LncRNA OIP5-AS1/cyrano sponges RNA-binding protein HuR
Jiyoung Kim1, Kotb Abdelmohsen1, Xiaoling Yang1
1Laboratory of Genetics, National Institute on Aging-Intramural Research Program, NIH, Baltimore, MD 21224, USA.
Abstract:
The function of the vast majority of mammalian long noncoding (lnc) RNAs remains unknown. Here, analysis of a highly abundant mammalian lncRNA, OIP5-AS1, known as cyrano in zebrafish, revealed that OIP5-AS1 reduces cell proliferation. In human cervical carcinoma HeLa cells, the RNA-binding protein HuR, which enhances cell proliferation, associated with OIP5-AS1 and stabilized it. Tagging OIP5-AS1 with MS2 hairpins to identify associated microRNAs revealed that miR-424 interacted with OIP5-AS1 and competed with HuR for binding to OIP5-AS1. We further identified a 'sponge' function for OIP5-AS1, as high levels of OIP5-AS1 increased HuR-OIP5-AS1 complexes and prevented HuR interaction with target mRNAs, including those that encoded proliferative proteins, while conversely, lowering OIP5-AS1 increased the abundance of HuR complexes with target mRNAs. We propose that OIP5-AS1 serves as a sponge or a competing endogenous (ce)RNA for HuR, restricting its availability to HuR target mRNAs and thereby repressing HuR-elicited proliferative phenotypes.
Insights
Long noncoding RNA OIP5-AS1 acts as a competing endogenous RNA (ceRNA) by sponging the HuR protein. This interaction reduces cell proliferation by limiting HuR
Area of Science:
- Molecular Biology
- Genetics
- Cancer Biology
Background:
- The functions of most mammalian long noncoding RNAs (lncRNAs) are not well understood.
- lncRNAs play crucial roles in various biological processes, including cell proliferation.
Purpose of the Study:
- To investigate the function of the abundant mammalian lncRNA OIP5-AS1.
- To elucidate the regulatory mechanism of OIP5-AS1 in cell proliferation.
Main Methods:
- Analysis of OIP5-AS1 expression and function in human cervical carcinoma HeLa cells.
- RNA immunoprecipitation assays to identify interacting proteins and RNAs.
- MS2 hairpin tagging to identify associated microRNAs.
- Assessment of HuR-target mRNA interactions.
Main Results:
- OIP5-AS1 was found to reduce cell proliferation.
- The RNA-binding protein HuR, a promoter of cell proliferation, binds and stabilizes OIP5-AS1.
- MicroRNA miR-424 interacts with OIP5-AS1, competing with HuR for binding.
- OIP5-AS1 acts as a competing endogenous RNA (ceRNA) or 'sponge' for HuR, sequestering it from its target mRNAs involved in proliferation.
Conclusions:
- OIP5-AS1 functions as a ceRNA for HuR, inhibiting its availability to target mRNAs.
- This mechanism represses HuR-mediated cell proliferation.
- OIP5-AS1 represents a novel regulatory factor in controlling cell proliferation through lncRNA-protein-mRNA interactions.
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