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Updated: Mar 26, 2026

Early Viral Entry Assays for the Identification and Evaluation of Antiviral Compounds
Published on: October 29, 2015
[RESISTANCE OF HCV TO NEW DIRECT ACTING ANTIVIRALS]
Insights
Hepatitis C virus (HCV) direct-acting antiviral (DAA) therapy can achieve high sustained virological response (SVR) rates. Determining HCV genotype and resistance mutations before treatment is crucial for successful outcomes and future retreatment planning.
Area of Science:
- Virology
- Hepatology
- Infectious Diseases
Context:
- Hepatitis C virus (HCV) affects 130-150 million globally, causing chronic liver disease.
- Direct-acting antivirals (DAAs) offer >90% sustained virological response (SVR) rates.
- HCV treatment success hinges on viral genotype, subtype, and drug resistance profiles.
Purpose:
- To review the role of HCV genotype and resistance mutations in DAA therapy.
- To discuss current guidelines on resistance testing for DAA-naïve and DAA-experienced patients.
- To highlight the need for more data on resistance mutation frequency for optimized retreatment strategies.
Summary:
- HCV is an RNA virus with 7 genotypes; genotype 1 is most prevalent.
- DAAs target HCV NS3/4A protease, NS5A, and NS5B polymerase.
- SVR, defined as undetectable HCV RNA 12 weeks post-treatment, is the therapeutic goal.
Impact:
- Pre-therapy HCV subtype determination is essential for effective treatment.
- Resistance testing is recommended for specific mutations (Q80K, L31V/A, Y93H/N) prior to certain DAA therapies.
- Further data on resistance mutation frequency will aid future retreatment planning and HCV eradication efforts.
Abstract:
Hepatitis C virus (HCV) is a leading cause of chronic viral hepatitis affecting 130-150 million people world-wide. HCV is an RNA virus of the Flaviviridae family, containing ~9600 nucleic acids coding for structural and nonstructural proteins, divided into 7 genotypes of which the most prevalent is genotype 1. The goal of HCV therapy is to achieve sustained virological response (SVR), currently defined as undetectable serum HCV RNA 12 weeks post-treatment. Treatment with the new direct acting antivirals (DAAs) that target the HCV protease NS3/4A, NS5A and the NS5B polymerase proteins can lead to more than 90% SVR. Successful treatment depends, among other factors, on the viral genotype and subtype and the barrier to resistance which depends on the number of mutations needed to cause drug resistance. To ensure effective treatment the HCV subtype should be determined prior to therapy. Resistance mutations that affect the new DAAs and are located in the three HCV drug target proteins have already been defined. The relevance of resistance testing in DAAs naïve individuals is controversial, though current American Association for the Study of Liver Diseases (AASLD) guidelines do recommend testing for Q80K mutation in the NS3 protein prior to simeprevir therapy and for the L31V/A and Y93H/N mutations in the NS5A prior to daclatasvir therapy. In cases of DAAs treatment failure, though the European Association for the Study of the Liver (EASL) guidance is not conclusive, the new AASLD guidance recommends NS3/4A and NS5A resistance testing prior to retreatment. Collecting more data on the frequency of resistance mutations prior to DAAs therapy and following virological failure will assist in future retreatment planning and potential eradication of HCV.
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