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Published on: January 28, 2020
Circulating "LncPPARδ" From Monocytes as a Novel Biomarker for Coronary Artery Diseases
Yue Cai1, Yujia Yang, Xiongwen Chen
1From the Department of Cardiology, Daping Hospital, The Third Military Medical University (YC, YY, XC, DH, XZ, XW, JH, CF, DQ, CZ, LZ); Chongqing Institute of Cardiology (YC, YY, XC, DH, XZ, XW, JH, CF, DQ, CZ, LZ); Department of Neurology, Daping Hospital, The Third Military Medical University (YC, YY), Chongqing, P.R. China; Cardiovascular Research Center and Department of Physiology, Temple University School of Medicine, Philadelphia, PA (XC); Division of Nephrology, Department of Medicine (PAJ) and Department of Physiology (PAJ), University of Maryland School of Medicine, Baltimore, MD.
Abstract:
To investigate long noncoding RNA NONHSAT112178 (LncPPARδ) as a biomarker for coronary artery disease (CAD) in peripheral blood monocyte cells, RT-qPCR was performed to validate the microarray results, receiver operating characteristic curve was applied to study the potential of LncPPARδ as a biomarker. Diagnostic models from LncPPARδ alone or combination of risk factors were constructed by Fisher criteria. The expression of genes neighboring the LncPPARδ gene was examined with RT-qPCR in THP-1 cell line treated with LncPPARδ siRNA. Using a diagnostic model by Fisher criteria, the consideration of risk factors increased the optimal sensitivity from 70.00% to 82.00% and decreased the specificity from 94.00% to 78.00%. The consideration of risk factors also increased area under the receiver operating characteristic curve from 0.727 to 0.785 (P = 0.001), from 0.712 to 0.768 (P = 0.01), and from 0.769 to 0.835 (P = 0.07), in the original, training, and test sets, respectively. Finally, we found that the expression of peroxisome proliferator-activated receptor δ (PPARδ), Adipose Differentiation-Related Protein (ADRP), and Angiopoietin-like 4 (ANGPTL4) were affected by LncPPARδ silencing.Our present study indicated that LncPPARδ, especially combined with risk factors, can be a good biomarker for CAD. LncPPARδ regulates the expression of neighboring protein-coding genes, PPARδ and its direct target genes ADRP and ANGPTL4.
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