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Published on: January 7, 2017
Classification of ADAMTS binding sites: The first step toward selective ADAMTS7 inhibitors
Michaela Müller1, Thorsten Kessler2, Heribert Schunkert2
1Institut für Integrative und Experimentelle Genomik, Universität zu Lübeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany; DZHK (German Centre for Cardiovascular Research), Partner Site Hamburg/Lübeck/Kiel, Germany; University Heart Center Luebeck, 23562 Lübeck, Germany.
Abstract:
Genome-wide association studies identified ADAMTS7 as a risk locus for coronary artery disease. In carotid arteries of rats, neointima formation after balloon-mediated injury goes along with enhanced Adamts7 expression. Vice versa, Adamts7-deficient mice display reduced neointima formation following vascular injury. Although a causal link between ADAMTS7 and coronary artery disease remains to be proven, inhibition of ADAMTS7 represents a potential new target for intervention in this disease. ADAMTS7, a member of the 'a disintegrin and metalloproteinase with thrombospondin motifs' (ADAMTS) family of proteins, contains a catalytic zinc ion in the binding site of its metalloproteinase domain. The structure of ADAMTS7 and its inhibitors are unknown. In this study, we used in silico methods, including homology modeling and pharmacophore modeling, to analyze the ADAMTS7 metalloproteinase domain, particularly its binding site. The results revealed structural and sequence differences relative to the binding sites of the other ADAMTS proteins; these non-conserved regions represent potential binding regions for selective ADAMTS7 inhibitors. The main contribution of this study is the proposal of a pharmacophore for ADAMTS7. The characterization of the ADAMTS7 binding site and definition of a pharmacophore are the first step toward developing a new therapeutic target for coronary artery disease.
Insights
Researchers identified a potential therapeutic target for coronary artery disease by analyzing the ADAMTS7 protein. This study characterized the ADAMTS7 binding site, paving the way for developing selective inhibitors to treat the disease.
Area of Science:
- Biochemistry
- Structural Biology
- Pharmacology
Background:
- Genome-wide association studies link ADAMTS7 to coronary artery disease (CAD) risk.
- ADAMTS7 expression increases with neointima formation in rat carotid arteries.
- ADAMTS7-deficient mice show reduced neointima formation after vascular injury.
Purpose of the Study:
- To characterize the metalloproteinase domain and binding site of ADAMTS7.
- To identify potential regions for selective ADAMTS7 inhibitor development.
- To establish ADAMTS7 as a therapeutic target for coronary artery disease.
Main Methods:
- In silico homology modeling of the ADAMTS7 metalloproteinase domain.
- In silico pharmacophore modeling to analyze the ADAMTS7 binding site.
- Comparative analysis of ADAMTS7 binding site with other ADAMTS proteins.
Main Results:
- Structural and sequence differences identified in the ADAMTS7 binding site compared to other ADAMTS proteins.
- Non-conserved regions in the binding site suggest potential for selective inhibitor design.
- A pharmacophore model for ADAMTS7 was proposed.
Conclusions:
- The characterization of the ADAMTS7 binding site is a crucial first step toward developing novel therapeutics for CAD.
- Targeting ADAMTS7 inhibition offers a potential new strategy for CAD intervention.
- The proposed pharmacophore can guide the design of selective ADAMTS7 inhibitors.
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