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Updated: Aug 8, 2026

Growth-based Determination and Biochemical Confirmation of Genetic Requirements for Protein Degradation in Saccharomyces cerevisiae
Published on: February 16, 2015
SEC62 encodes a putative membrane protein required for protein translocation into the yeast endoplasmic reticulum
1Division of Biochemistry and Molecular Biology, University of California, Berkeley 94720.
Insights
Yeast sec62 mutants show defects in protein translocation into the endoplasmic reticulum. This defect is localized to the membrane, not the cytosol, and the SEC62 gene product may span the ER membrane.
Area of Science:
- Cell Biology
- Molecular Biology
- Protein Translocation
Background:
- Yeast sec62 mutant cells exhibit impaired translocation of secretory proteins into the endoplasmic reticulum (ER).
- This defect is particularly pronounced for alpha-factor precursor (pp alpha F) and preprocarboxypeptidase Y.
Purpose of the Study:
- To investigate the molecular basis of the sec62 mutant's protein translocation defect.
- To determine the cellular localization and potential function of the SEC62 gene product.
Main Methods:
- In vitro translocation assays using membranes and cytosol from wild-type and sec62 mutant yeast cells.
- DNA sequence analysis of the SEC62 gene to predict the protein's structure and localization.
Main Results:
- Mutant membranes showed significantly reduced and unstable translocation activity for pp alpha F compared to wild-type membranes.
- The translocation defect was specific to the membrane fraction, as mutant cytosol supported translocation into wild-type membranes.
- SEC62 gene product (Sec62p) is predicted to be a 32-kD transmembrane protein with cytoplasmic N- and C-terminal domains.
Conclusions:
- The sec62 mutation impairs protein translocation at the ER membrane level.
- Sec62p is likely an integral component of the ER protein translocation machinery, potentially interacting with other complex proteins.
Abstract:
Yeast sec62 mutant cells are defective in the translocation of several secretory precursor proteins into the lumen of the endoplasmic reticulum (Rothblatt et al., 1989). The deficiency, which is most restrictive for alpha-factor precursor (pp alpha F) and preprocarboxypeptidase Y, has been reproduced in vitro. Membranes isolated from mutant cells display low and labile translocation activity with pp alpha F translated in a wild-type cytosol fraction. The defect is unique to the membrane fraction because cytosol from mutant cells supports translocation into membranes from wild-type yeast. Invertase assembly is only partly affected by the sec62 mutation in vivo and is nearly normal with mutant membranes in vitro. A potential membrane location for the SEC62 gene product is supported by evaluation of the molecular clone. DNA sequence analysis reveals a 32-kD protein with no obvious NH2-terminal signal sequence but with two domains of sufficient length and hydrophobicity to span a lipid bilayer. Sec62p is predicted to display significant NH2- and COOH-terminal hydrophilic domains on the cytoplasmic surface of the ER membrane. The last 30 amino acids of the COOH terminus may form an alpha-helix with 14 lysine and arginine residues arranged uniformly about the helix. This domain may allow Sec62p to interact with other proteins of the putative translocation complex.
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