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Updated: Mar 25, 2026

Extraction of Cofactor F420 for Analysis of Polyglutamate Tail Length from Methanogenic Pure Cultures and Environmental Samples
Published on: October 14, 2021
Protonation state of F420H2 in the prodrug-activating deazaflavin dependent nitroreductase (Ddn) from Mycobacterium
A Elaaf Mohamed1, F Hafna Ahmed, Sundaram Arulmozhiraja
1Research School of Chemistry, The Australian National University, Canberra, ACT 2601, Australia. colin.jackson@anu.edu.au michelle.coote@anu.edu.au.
Abstract:
The protonation state of the deazaflavin dependent nitroreductase (Ddn) enzyme bound cofactor F420 was investigated using UV-visible spectroscopy and computational simulations. The reduced cofactor F420H2 was determined to be present in its deprotonated state in the holoenzyme form. The mechanistic implications of these findings are discussed.
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meta-Directing Deactivators: –NO2, –CN, –CHO, –⁠CO2R, –COR, –CO2H
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Diazonium Group Substitution: –OH and –H
ortho–para-Directing Deactivators: Halogens