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A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
A synthetic-lethality RNAi screen reveals an ERK-mTOR co-targeting pro-apoptotic switch in PIK3CA+ oral cancers
Kosuke Yamaguchi1, Ramiro Iglesias-Bartolomé2, Zhiyong Wang1
1Moores Cancer Center, University of California San Diego, San Diego, CA, USA.
Abstract:
mTOR inhibition has emerged as a promising strategy for head and neck squamous cell carcinomas (HNSCC) treatment. However, most targeted therapies ultimately develop resistance due to the activation of adaptive survival signaling mechanisms limiting the activity of targeted agents. Thus, co-targeting key adaptive mechanisms may enable more effective cancer cell killing. Here, we performed a synthetic lethality screen using shRNA libraries to identify druggable candidates for combinatorial signal inhibition. We found that the ERK pathway was the most highly represented. Combination of rapamycin with trametinib, a MEK1/2 inhibitor, demonstrated strong synergism in HNSCC-derived cells in vitro and in vivo, including HNSCC cells expressing the HRAS and PIK3CA oncogenes. Interestingly, cleaved caspase-3 was potently induced by the combination therapy in PIK3CA+ cells in vitro and tumor xenografts. Moreover, ectopic expression of PIK3CA mutations into PIK3CA- HNSCC cells sensitized them to the pro-apoptotic activity of the combination therapy. These findings indicate that co-targeting the mTOR/ERK pathways may provide a suitable precision strategy for HNSCC treatment. Moreover, PIK3CA+ HNSCC are particularly prone to undergo apoptosis after mTOR and ERK inhibition, thereby providing a potential biomarker of predictive value for the selection of patients that may benefit from this combination therapy.
Insights
Combining mTOR and ERK pathway inhibitors shows promise for head and neck squamous cell carcinoma (HNSCC) treatment. This combination therapy, particularly effective in PIK3CA-mutated HNSCC, offers a potential precision strategy for improved patient outcomes.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Therapeutics
Background:
- Targeted therapies for head and neck squamous cell carcinomas (HNSCC) face resistance due to adaptive survival signaling.
- Co-targeting key signaling pathways is crucial for overcoming treatment resistance and enhancing cancer cell killing.
Purpose of the Study:
- To identify druggable targets for combinatorial signal inhibition in HNSCC.
- To evaluate the efficacy of co-targeting the mTOR and ERK pathways in HNSCC treatment.
Main Methods:
- Conducted a synthetic lethality screen using shRNA libraries to identify targets for combination therapy.
- Investigated the synergistic effects of rapamycin (mTOR inhibitor) and trametinib (MEK1/2 inhibitor) in HNSCC cells in vitro and in vivo.
- Assessed apoptosis induction via cleaved caspase-3 activation and evaluated the role of PIK3CA mutations.
Main Results:
- The ERK pathway was identified as a highly represented target for combinatorial inhibition.
- Combination therapy demonstrated significant synergism in HNSCC cells, including those with HRAS and PIK3CA oncogenes.
- PIK3CA-mutated HNSCC cells showed potent induction of cleaved caspase-3 and were sensitized to the combination therapy's pro-apoptotic effects.
Conclusions:
- Co-targeting the mTOR and ERK pathways represents a viable precision strategy for HNSCC treatment.
- PIK3CA mutations may serve as a predictive biomarker for patient selection in response to mTOR and ERK inhibition.
- This combination therapy holds potential for more effective HNSCC management.
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