Novel somatic mutations identified by whole-exome sequencing in muscle-invasive transitional cell carcinoma of the

Huixing Pan1, Xiaojian Xu2, Deyao Wu3

  • 1Department of Urology, The First Affiliated Hospital of Soochow University, Suzhou, Jiangsu 215006, P.R. China; Department of Urology, The Fourth Affiliated Hospital of Nantong Medical College, Yancheng City No. 1 People's Hospital, Yancheng, Jiangsu 224006, P.R. China.

Oncology Letters
|February 20, 2016
PubMed

Insights

Researchers identified novel gene mutations in muscle-invasive transitional cell carcinoma (MI-TCC). The study found mutations in the HECT, C2 and WW domain-containing E3 ubiquitin protein ligase 1 (HECW1) gene, suggesting its role in bladder cancer development.

Area of Science:

  • Oncology
  • Genetics
  • Molecular Biology

Background:

  • Transitional cell carcinoma (TCC) is a prevalent global cancer, with bladder cancer being a significant subset.
  • Identifying novel genetic drivers is crucial for advancing TCC diagnosis and treatment.
  • Previous research suggests numerous undiscovered genes may contribute to TCC pathogenesis.

Purpose of the Study:

  • To investigate potential genetic variants in muscle-invasive TCC (MI-TCC) through exome sequencing.
  • To identify novel genes implicated in the development of MI-TCC.
  • To assess the expression levels of HECT, C2 and WW domain-containing E3 ubiquitin protein ligase 1 (HECW1) in MI-TCC.

Main Methods:

  • Exome sequencing of two MI-TCC individuals.
  • Bioinformatic analysis and filtering of sequencing data.
  • Validation using Sanger sequencing.
  • Immunohistochemistry (IHC) to evaluate HECW1 protein expression in tumor and adjacent tissues.

Main Results:

  • Six nonsynonymous mutation genes were identified in MI-TCC.
  • HECW1 gene mutations were found in 5 out of 61 MI-TCC specimens, specifically point mutations in exon 11.
  • HECW1 protein expression was significantly elevated in MI-TCC tissues compared to normal bladder urothelium (P<0.001).

Conclusions:

  • Exome sequencing offers a novel approach to uncover genetic alterations in MI-TCC.
  • HECW1 is identified as a novel mutant gene potentially involved in TCC pathogenesis.
  • Elevated HECW1 expression suggests its role in the progression of muscle-invasive bladder cancer.