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Updated: Mar 25, 2026

Isolation of Whole Cell Protein Lysates from Mouse Facial Processes and Cultured Palatal Mesenchyme Cells for Phosphoprotein Analysis
Published on: April 1, 2022
A phospho-dependent mechanism involving NCoR and KMT2D controls a permissive chromatin state at Notch target genes
Franz Oswald1, Patrick Rodriguez2, Benedetto Daniele Giaimo3
1University Medical Center Ulm, Center for Internal Medicine, Department of Internal Medicine I, Albert-Einstein-Allee 23, 89081 Ulm, Germany franz.oswald@uni-ulm.de.
Abstract:
The transcriptional shift from repression to activation of target genes is crucial for the fidelity of Notch responses through incompletely understood mechanisms that likely involve chromatin-based control. To activate silenced genes, repressive chromatin marks are removed and active marks must be acquired. Histone H3 lysine-4 (H3K4) demethylases are key chromatin modifiers that establish the repressive chromatin state at Notch target genes. However, the counteracting histone methyltransferase required for the active chromatin state remained elusive. Here, we show that the RBP-J interacting factor SHARP is not only able to interact with the NCoR corepressor complex, but also with the H3K4 methyltransferase KMT2D coactivator complex. KMT2D and NCoR compete for the C-terminal SPOC-domain of SHARP. We reveal that the SPOC-domain exclusively binds to phosphorylated NCoR. The balance between NCoR and KMT2D binding is shifted upon mutating the phosphorylation sites of NCoR or upon inhibition of the NCoR kinase CK2β. Furthermore, we show that the homologs of SHARP and KMT2D in Drosophila also physically interact and control Notch-mediated functions in vivo Together, our findings reveal how signaling can fine-tune a committed chromatin state by phosphorylation of a pivotal chromatin-modifier.
Insights
Notch gene activation relies on switching from repressive to active chromatin marks. SHARP protein balances these states by interacting with repressors (NCoR) and activators (KMT2D), controlled by NCoR phosphorylation.
Area of Science:
- Molecular Biology
- Epigenetics
- Developmental Biology
Background:
- Notch signaling controls gene expression through dynamic chromatin changes.
- Histone H3 lysine-4 (H3K4) demethylases establish repressive chromatin states at Notch target genes.
- The histone methyltransferase counteracting this process remained unidentified.
Purpose of the Study:
- To identify the histone methyltransferase involved in Notch target gene activation.
- To elucidate the mechanism by which chromatin states are switched for Notch responses.
- To investigate the role of SHARP protein in coordinating these chromatin modifications.
Main Methods:
- Co-immunoprecipitation assays to study protein interactions.
- Site-directed mutagenesis to investigate phosphorylation effects.
- In vivo studies using Drosophila homologs of SHARP and KMT2D.
- Biochemical assays to analyze protein complex formation.
Main Results:
- SHARP interacts with both the NCoR corepressor and the KMT2D histone methyltransferase complex.
- KMT2D and NCoR compete for binding to SHARP's SPOC-domain.
- Phosphorylation of NCoR dictates its binding to SHARP, influencing the balance between repression and activation.
- SHARP and KMT2D homologs in Drosophila regulate Notch-mediated functions.
Conclusions:
- Signaling-mediated phosphorylation of NCoR fine-tunes SHARP's interaction with KMT2D, thereby controlling chromatin states.
- This mechanism reveals how phosphorylation regulates the switch between gene repression and activation in Notch signaling.
- The findings highlight a conserved mechanism for chromatin-based control of developmental signaling pathways.
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